RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 DSTQ03001 7570 aaKnown RBP6.87□□□□□ -1.31
HOXD3-204ENST00000459979 LCE5AQ5TCM9 118 aa6.84□□□□□ -1.31
HOXD3-204ENST00000459979 KRTAP19-3Q7Z4W3 81 aa6.81□□□□□ -1.32
HOXD3-204ENST00000459979 C10orf95Q9H7T3 257 aa6.81□□□□□ -1.32
HOXD3-204ENST00000459979 KRTAP4-2Q9BYR5 136 aa6.8□□□□□ -1.32
HOXD3-204ENST00000459979 KRTAP19-5Q3LI72 72 aa6.78□□□□□ -1.32
HOXD3-204ENST00000459979 UQCR11O14957 56 aa6.77□□□□□ -1.33
HOXD3-204ENST00000459979 TNP1P09430 55 aa6.76□□□□□ -1.33
HOXD3-204ENST00000459979 KRTAP4-11Q9BYQ6 195 aa6.74□□□□□ -1.33
HOXD3-204ENST00000459979 MT1GP13640 62 aa6.68□□□□□ -1.34
HOXD3-204ENST00000459979 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
HOXD3-204ENST00000459979 V9GYY9 64 aa6.62□□□□□ -1.35
HOXD3-204ENST00000459979 MIR22HGQ0VDD5 57 aa6.61□□□□□ -1.35
HOXD3-204ENST00000459979 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
HOXD3-204ENST00000459979 MT1LQ93083 61 aa6.59□□□□□ -1.35
HOXD3-204ENST00000459979 MT4P47944 62 aa6.58□□□□□ -1.36
HOXD3-204ENST00000459979 Q1T7F1 81 aa6.58□□□□□ -1.36
HOXD3-204ENST00000459979 MT1MQ8N339 61 aa6.54□□□□□ -1.36
HOXD3-204ENST00000459979 PSPHP1O15172 72 aa6.51□□□□□ -1.37
HOXD3-204ENST00000459979 HMCN1Q96RW7 5635 aa6.47□□□□□ -1.37
HOXD3-204ENST00000459979 K7ERS5 55 aa6.47□□□□□ -1.37
HOXD3-204ENST00000459979 KRTAP25-1Q3LHN0 102 aa6.45□□□□□ -1.38
HOXD3-204ENST00000459979 KRTAP12-3P60328 96 aa6.44□□□□□ -1.38
HOXD3-204ENST00000459979 AHNAK2Q8IVF2 5795 aa6.42□□□□□ -1.38
HOXD3-204ENST00000459979 KRTAP4-3Q9BYR4 195 aa6.39□□□□□ -1.39
HOXD3-204ENST00000459979 KRTAP5-10Q6L8G5 202 aa6.36□□□□□ -1.39
HOXD3-204ENST00000459979 PCP4P48539 62 aa6.35□□□□□ -1.39
HOXD3-204ENST00000459979 RPS28P62857 69 aaKnown RBP6.34□□□□□ -1.39
HOXD3-204ENST00000459979 KRTAP5-4Q6L8H1 288 aa6.34□□□□□ -1.39
HOXD3-204ENST00000459979 A6NED7 52 aa6.3□□□□□ -1.4
HOXD3-204ENST00000459979 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
HOXD3-204ENST00000459979 KRTAP5-7Q6L8G8 165 aa6.15□□□□□ -1.42
HOXD3-204ENST00000459979 KRTAP5-3Q6L8H2 238 aa6.14□□□□□ -1.43
HOXD3-204ENST00000459979 CDC42SE1Q9NRR8 79 aa6.13□□□□□ -1.43
HOXD3-204ENST00000459979 ROMO1P60602 79 aa6.06□□□□□ -1.44
HOXD3-204ENST00000459979 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
HOXD3-204ENST00000459979 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
HOXD3-204ENST00000459979 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
HOXD3-204ENST00000459979 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
HOXD3-204ENST00000459979 LCE3CQ5T5A8 94 aa5.95□□□□□ -1.46
HOXD3-204ENST00000459979 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
HOXD3-204ENST00000459979 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
HOXD3-204ENST00000459979 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
HOXD3-204ENST00000459979 MT1AP04731 61 aa5.62□□□□□ -1.51
HOXD3-204ENST00000459979 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
HOXD3-204ENST00000459979 KRTAP6-1Q3LI64 71 aa5.56□□□□□ -1.52
HOXD3-204ENST00000459979 KRTAP5-2Q701N4 177 aa5.5□□□□□ -1.53
HOXD3-204ENST00000459979 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
HOXD3-204ENST00000459979 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
HOXD3-204ENST00000459979 MUC5ACP98088 5654 aa5.31□□□□□ -1.56
HOXD3-204ENST00000459979 AHNAKQ09666 5890 aaKnown RBP5.3□□□□□ -1.56
HOXD3-204ENST00000459979 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
HOXD3-204ENST00000459979 MUC5BQ9HC84 5762 aaPredicted RBP5.26□□□□□ -1.57
HOXD3-204ENST00000459979 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
HOXD3-204ENST00000459979 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
HOXD3-204ENST00000459979 MT3P25713 68 aa5.14□□□□□ -1.59
HOXD3-204ENST00000459979 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
HOXD3-204ENST00000459979 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
HOXD3-204ENST00000459979 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
HOXD3-204ENST00000459979 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
HOXD3-204ENST00000459979 KTN1-AS1Q86SY8 53 aa4.63□□□□□ -1.67
HOXD3-204ENST00000459979 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
HOXD3-204ENST00000459979 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
HOXD3-204ENST00000459979 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
HOXD3-204ENST00000459979 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
HOXD3-204ENST00000459979 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
HOXD3-204ENST00000459979 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
HOXD3-204ENST00000459979 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
HOXD3-204ENST00000459979 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
HOXD3-204ENST00000459979 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
HOXD3-204ENST00000459979 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
HOXD3-204ENST00000459979 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
HOXD3-204ENST00000459979 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
HOXD3-204ENST00000459979 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
HOXD3-204ENST00000459979 INE1O15225 51 aa3.11□□□□□ -1.91
HOXD3-204ENST00000459979 PRM1P04553 51 aa3.07□□□□□ -1.92
HOXD3-204ENST00000459979 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
HOXD3-204ENST00000459979 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 58 ms