RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 SPANXA2-OT1Q8N9U9 137 aa2.89□□□□□ -1.95
HPS4-207ENST00000459918 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
HPS4-207ENST00000459918 MT1GP13640 62 aa2.87□□□□□ -1.95
HPS4-207ENST00000459918 SPRR5A0A1B0GTR4 108 aa2.85□□□□□ -1.95
HPS4-207ENST00000459918 A0A0D9SG42 100 aa2.84□□□□□ -1.95
HPS4-207ENST00000459918 H7BZZ5 65 aa2.84□□□□□ -1.95
HPS4-207ENST00000459918 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
HPS4-207ENST00000459918 CCDC179H3BU77 68 aa2.83□□□□□ -1.96
HPS4-207ENST00000459918 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
HPS4-207ENST00000459918 MT1MQ8N339 61 aa2.82□□□□□ -1.96
HPS4-207ENST00000459918 MT3P25713 68 aa2.8□□□□□ -1.96
HPS4-207ENST00000459918 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
HPS4-207ENST00000459918 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
HPS4-207ENST00000459918 COA5Q86WW8 74 aa2.78□□□□□ -1.96
HPS4-207ENST00000459918 ATP5EP56381 51 aaPredicted RBP2.77□□□□□ -1.97
HPS4-207ENST00000459918 SPATA8Q6RVD6 105 aa2.77□□□□□ -1.97
HPS4-207ENST00000459918 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
HPS4-207ENST00000459918 MT1LQ93083 61 aa2.76□□□□□ -1.97
HPS4-207ENST00000459918 TMEM258P61165 79 aa2.75□□□□□ -1.97
HPS4-207ENST00000459918 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
HPS4-207ENST00000459918 SEC61GP60059 68 aa2.73□□□□□ -1.97
HPS4-207ENST00000459918 SERP1Q9Y6X1 66 aa2.73□□□□□ -1.97
HPS4-207ENST00000459918 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
HPS4-207ENST00000459918 A0A1B0GU33 70 aa2.71□□□□□ -1.98
HPS4-207ENST00000459918 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
HPS4-207ENST00000459918 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
HPS4-207ENST00000459918 C10orf95Q9H7T3 257 aa2.69□□□□□ -1.98
HPS4-207ENST00000459918 A0A1B0GU69 56 aa2.67□□□□□ -1.98
HPS4-207ENST00000459918 A8MU10 97 aa2.65□□□□□ -1.99
HPS4-207ENST00000459918 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
HPS4-207ENST00000459918 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
HPS4-207ENST00000459918 PRR15LQ9BU68 103 aa2.65□□□□□ -1.99
HPS4-207ENST00000459918 LINC01558Q9Y6Z2 57 aa2.63□□□□□ -1.99
HPS4-207ENST00000459918 TNP1P09430 55 aa2.62□□□□□ -1.99
HPS4-207ENST00000459918 RPS28P62857 69 aaKnown RBP2.62□□□□□ -1.99
HPS4-207ENST00000459918 SMIM26A0A096LP01 95 aa2.61□□□□□ -1.99
HPS4-207ENST00000459918 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
HPS4-207ENST00000459918 V9GYY9 64 aa2.61□□□□□ -1.99
HPS4-207ENST00000459918 Q1T7F1 81 aa2.58□□□□□ -2
HPS4-207ENST00000459918 UQCR11O14957 56 aa2.56□□□□□ -2
HPS4-207ENST00000459918 KRTAP12-3P60328 96 aa2.56□□□□□ -2
HPS4-207ENST00000459918 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
HPS4-207ENST00000459918 PSPHP1O15172 72 aa2.54□□□□□ -2
HPS4-207ENST00000459918 MIR22HGQ0VDD5 57 aa2.51□□□□□ -2.01
HPS4-207ENST00000459918 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
HPS4-207ENST00000459918 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
HPS4-207ENST00000459918 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
HPS4-207ENST00000459918 A6NED7 52 aa2.48□□□□□ -2.01
HPS4-207ENST00000459918 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
HPS4-207ENST00000459918 K7ERS5 55 aa2.47□□□□□ -2.01
HPS4-207ENST00000459918 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
HPS4-207ENST00000459918 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
HPS4-207ENST00000459918 PRAC1Q96KF2 57 aa2.45□□□□□ -2.02
HPS4-207ENST00000459918 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
HPS4-207ENST00000459918 KRTAP25-1Q3LHN0 102 aa2.39□□□□□ -2.03
HPS4-207ENST00000459918 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
HPS4-207ENST00000459918 CDC42SE1Q9NRR8 79 aa2.39□□□□□ -2.03
HPS4-207ENST00000459918 MT1AP04731 61 aa2.35□□□□□ -2.03
HPS4-207ENST00000459918 KRTAP6-1Q3LI64 71 aa2.35□□□□□ -2.03
HPS4-207ENST00000459918 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
HPS4-207ENST00000459918 PRO0628Q9UI54 55 aa2.31□□□□□ -2.04
HPS4-207ENST00000459918 BRK1Q8WUW1 75 aa2.3□□□□□ -2.04
HPS4-207ENST00000459918 ROMO1P60602 79 aa2.29□□□□□ -2.04
HPS4-207ENST00000459918 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
HPS4-207ENST00000459918 PMAIP1Q13794 54 aa2.2□□□□□ -2.06
HPS4-207ENST00000459918 NDUFAF8A1L188 74 aa2.17□□□□□ -2.06
HPS4-207ENST00000459918 KTN1-AS1Q86SY8 53 aa2.08□□□□□ -2.08
HPS4-207ENST00000459918 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
HPS4-207ENST00000459918 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
HPS4-207ENST00000459918 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
HPS4-207ENST00000459918 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
HPS4-207ENST00000459918 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
HPS4-207ENST00000459918 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
HPS4-207ENST00000459918 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
HPS4-207ENST00000459918 INE1O15225 51 aa1.46□□□□□ -2.18
HPS4-207ENST00000459918 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
HPS4-207ENST00000459918 PRM1P04553 51 aa1.17□□□□□ -2.22
HPS4-207ENST00000459918 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 55.3 ms