RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
MCF2L2-204ENST00000459750 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
MCF2L2-204ENST00000459750 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
MCF2L2-204ENST00000459750 CRCT1Q9UGL9 99 aa3.21□□□□□ -1.9
MCF2L2-204ENST00000459750 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
MCF2L2-204ENST00000459750 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
MCF2L2-204ENST00000459750 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
MCF2L2-204ENST00000459750 LOC100996750A0A140TA64 210 aa3.15□□□□□ -1.91
MCF2L2-204ENST00000459750 KRTAP19-6Q3LI70 58 aa3.15□□□□□ -1.91
MCF2L2-204ENST00000459750 MT1EP04732 61 aa3.14□□□□□ -1.91
MCF2L2-204ENST00000459750 MT1LQ93083 61 aa3.13□□□□□ -1.91
MCF2L2-204ENST00000459750 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
MCF2L2-204ENST00000459750 MT1GP13640 62 aa3.08□□□□□ -1.92
MCF2L2-204ENST00000459750 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
MCF2L2-204ENST00000459750 KRTAP9-7A8MTY7 169 aa2.99□□□□□ -1.93
MCF2L2-204ENST00000459750 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.93
MCF2L2-204ENST00000459750 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
MCF2L2-204ENST00000459750 MT1MQ8N339 61 aa2.96□□□□□ -1.94
MCF2L2-204ENST00000459750 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
MCF2L2-204ENST00000459750 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
MCF2L2-204ENST00000459750 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
MCF2L2-204ENST00000459750 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
MCF2L2-204ENST00000459750 LCE5AQ5TCM9 118 aa2.85□□□□□ -1.95
MCF2L2-204ENST00000459750 LCE3BQ5TA77 95 aa2.84□□□□□ -1.95
MCF2L2-204ENST00000459750 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.96
MCF2L2-204ENST00000459750 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
MCF2L2-204ENST00000459750 SPRR2EP22531 72 aa2.82□□□□□ -1.96
MCF2L2-204ENST00000459750 SPRR2BP35325 72 aa2.82□□□□□ -1.96
MCF2L2-204ENST00000459750 SPRR2AP35326 72 aa2.82□□□□□ -1.96
MCF2L2-204ENST00000459750 LCE4AQ5TA78 99 aa2.79□□□□□ -1.96
MCF2L2-204ENST00000459750 LCE1AQ5T7P2 110 aa2.79□□□□□ -1.96
MCF2L2-204ENST00000459750 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
MCF2L2-204ENST00000459750 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
MCF2L2-204ENST00000459750 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
MCF2L2-204ENST00000459750 KRTAP9-4Q9BYQ2 154 aa2.71□□□□□ -1.98
MCF2L2-204ENST00000459750 SPRR2DP22532 72 aa2.68□□□□□ -1.98
MCF2L2-204ENST00000459750 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
MCF2L2-204ENST00000459750 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
MCF2L2-204ENST00000459750 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
MCF2L2-204ENST00000459750 LCE1FQ5T754 118 aa2.57□□□□□ -2
MCF2L2-204ENST00000459750 MT1AP04731 61 aa2.56□□□□□ -2
MCF2L2-204ENST00000459750 LCE1DQ5T752 114 aa2.56□□□□□ -2
MCF2L2-204ENST00000459750 NEBP20929 6669 aa2.54□□□□□ -2
MCF2L2-204ENST00000459750 PRM1P04553 51 aa2.54□□□□□ -2
MCF2L2-204ENST00000459750 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
MCF2L2-204ENST00000459750 MT4P47944 62 aa2.51□□□□□ -2.01
MCF2L2-204ENST00000459750 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
MCF2L2-204ENST00000459750 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
MCF2L2-204ENST00000459750 KRTAP4-6Q9BYQ5 205 aa2.45□□□□□ -2.02
MCF2L2-204ENST00000459750 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
MCF2L2-204ENST00000459750 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
MCF2L2-204ENST00000459750 MT3P25713 68 aa2.34□□□□□ -2.04
MCF2L2-204ENST00000459750 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
MCF2L2-204ENST00000459750 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
MCF2L2-204ENST00000459750 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
MCF2L2-204ENST00000459750 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
MCF2L2-204ENST00000459750 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
MCF2L2-204ENST00000459750 MUC5ACP98088 5654 aa2.15□□□□□ -2.06
MCF2L2-204ENST00000459750 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
MCF2L2-204ENST00000459750 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
MCF2L2-204ENST00000459750 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
MCF2L2-204ENST00000459750 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
MCF2L2-204ENST00000459750 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
MCF2L2-204ENST00000459750 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
MCF2L2-204ENST00000459750 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
MCF2L2-204ENST00000459750 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
MCF2L2-204ENST00000459750 KRTAP4-11Q9BYQ6 195 aa1.91□□□□□ -2.1
MCF2L2-204ENST00000459750 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
MCF2L2-204ENST00000459750 KRTAP4-2Q9BYR5 136 aa1.85□□□□□ -2.11
MCF2L2-204ENST00000459750 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
MCF2L2-204ENST00000459750 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
MCF2L2-204ENST00000459750 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
MCF2L2-204ENST00000459750 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
MCF2L2-204ENST00000459750 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.14
MCF2L2-204ENST00000459750 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
MCF2L2-204ENST00000459750 KRTAP5-11Q6L8G4 156 aa1.51□□□□□ -2.17
MCF2L2-204ENST00000459750 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
MCF2L2-204ENST00000459750 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 63 ms