RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PRAC1Q96KF2 57 aa2.37□□□□□ -2.03
RNU1-88P-201ENST00000459274 KRTAP19-6Q3LI70 58 aa2.36□□□□□ -2.03
RNU1-88P-201ENST00000459274 KRTAP10-12P60413 245 aa2.35□□□□□ -2.03
RNU1-88P-201ENST00000459274 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
RNU1-88P-201ENST00000459274 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
RNU1-88P-201ENST00000459274 CRCT1Q9UGL9 99 aa2.33□□□□□ -2.04
RNU1-88P-201ENST00000459274 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
RNU1-88P-201ENST00000459274 LCE3AQ5TA76 89 aa2.27□□□□□ -2.05
RNU1-88P-201ENST00000459274 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
RNU1-88P-201ENST00000459274 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
RNU1-88P-201ENST00000459274 KRTAP15-1Q3LI76 137 aa2.2□□□□□ -2.06
RNU1-88P-201ENST00000459274 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
RNU1-88P-201ENST00000459274 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
RNU1-88P-201ENST00000459274 SPRR2FQ96RM1 72 aa2.16□□□□□ -2.06
RNU1-88P-201ENST00000459274 H3BS24 57 aa2.13□□□□□ -2.07
RNU1-88P-201ENST00000459274 FSIP2Q5CZC0 6907 aa2.13□□□□□ -2.07
RNU1-88P-201ENST00000459274 USH2AO75445 5202 aa2.1□□□□□ -2.07
RNU1-88P-201ENST00000459274 MT1EP04732 61 aa2.09□□□□□ -2.07
RNU1-88P-201ENST00000459274 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.07
RNU1-88P-201ENST00000459274 KRTAP19-7Q3SYF9 63 aa2.09□□□□□ -2.07
RNU1-88P-201ENST00000459274 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
RNU1-88P-201ENST00000459274 MT1GP13640 62 aa2.08□□□□□ -2.08
RNU1-88P-201ENST00000459274 LCE3CQ5T5A8 94 aa2.08□□□□□ -2.08
RNU1-88P-201ENST00000459274 SPRR2EP22531 72 aa2.07□□□□□ -2.08
RNU1-88P-201ENST00000459274 SPRR2BP35325 72 aa2.07□□□□□ -2.08
RNU1-88P-201ENST00000459274 SPRR2AP35326 72 aa2.07□□□□□ -2.08
RNU1-88P-201ENST00000459274 KRTAP19-3Q7Z4W3 81 aa2.06□□□□□ -2.08
RNU1-88P-201ENST00000459274 SSPOA2VEC9 5147 aa2.06□□□□□ -2.08
RNU1-88P-201ENST00000459274 MT1LQ93083 61 aa2.05□□□□□ -2.08
RNU1-88P-201ENST00000459274 LCE1AQ5T7P2 110 aa2.01□□□□□ -2.09
RNU1-88P-201ENST00000459274 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
RNU1-88P-201ENST00000459274 SPRR2DP22532 72 aa2□□□□□ -2.09
RNU1-88P-201ENST00000459274 MT1MQ8N339 61 aa1.98□□□□□ -2.09
RNU1-88P-201ENST00000459274 SPRR5A0A1B0GTR4 108 aa1.97□□□□□ -2.09
RNU1-88P-201ENST00000459274 A0A0A0MQY5 61 aa1.96□□□□□ -2.1
RNU1-88P-201ENST00000459274 NDUFAF8A1L188 74 aa1.94□□□□□ -2.1
RNU1-88P-201ENST00000459274 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
RNU1-88P-201ENST00000459274 KRTAP2-3P0C7H8 128 aa1.89□□□□□ -2.11
RNU1-88P-201ENST00000459274 KRTAP2-4Q9BYR9 128 aa1.89□□□□□ -2.11
RNU1-88P-201ENST00000459274 KMT2DO14686 5537 aa1.88□□□□□ -2.11
RNU1-88P-201ENST00000459274 KRTAP20-1Q3LI63 56 aa1.85□□□□□ -2.11
RNU1-88P-201ENST00000459274 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
RNU1-88P-201ENST00000459274 KRTAP2-2Q9BYT5 123 aa1.84□□□□□ -2.11
RNU1-88P-201ENST00000459274 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.11
RNU1-88P-201ENST00000459274 KRTAP9-6A8MVA2 160 aa1.81□□□□□ -2.12
RNU1-88P-201ENST00000459274 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
RNU1-88P-201ENST00000459274 MT1AP04731 61 aa1.78□□□□□ -2.12
RNU1-88P-201ENST00000459274 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
RNU1-88P-201ENST00000459274 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
RNU1-88P-201ENST00000459274 MT4P47944 62 aa1.71□□□□□ -2.14
RNU1-88P-201ENST00000459274 KRTAP6-1Q3LI64 71 aa1.71□□□□□ -2.14
RNU1-88P-201ENST00000459274 DSTQ03001 7570 aaKnown RBP1.69□□□□□ -2.14
RNU1-88P-201ENST00000459274 INE1O15225 51 aa1.68□□□□□ -2.14
RNU1-88P-201ENST00000459274 MT3P25713 68 aa1.68□□□□□ -2.14
RNU1-88P-201ENST00000459274 NEBP20929 6669 aa1.65□□□□□ -2.14
RNU1-88P-201ENST00000459274 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
RNU1-88P-201ENST00000459274 KRTAP20-2Q3LI61 65 aa1.61□□□□□ -2.15
RNU1-88P-201ENST00000459274 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
RNU1-88P-201ENST00000459274 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
RNU1-88P-201ENST00000459274 LCE3EQ5T5B0 92 aa1.55□□□□□ -2.16
RNU1-88P-201ENST00000459274 SYNE1Q8NF91 8797 aaKnown RBP1.43□□□□□ -2.18
RNU1-88P-201ENST00000459274 LCE1CQ5T751 118 aa1.4□□□□□ -2.19
RNU1-88P-201ENST00000459274 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
RNU1-88P-201ENST00000459274 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
RNU1-88P-201ENST00000459274 PRM1P04553 51 aa1.29□□□□□ -2.2
RNU1-88P-201ENST00000459274 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
RNU1-88P-201ENST00000459274 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
RNU1-88P-201ENST00000459274 LCE1FQ5T754 118 aa1.21□□□□□ -2.22
RNU1-88P-201ENST00000459274 AHNAK2Q8IVF2 5795 aa1.16□□□□□ -2.22
RNU1-88P-201ENST00000459274 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
RNU1-88P-201ENST00000459274 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
RNU1-88P-201ENST00000459274 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
RNU1-88P-201ENST00000459274 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
RNU1-88P-201ENST00000459274 MUC5BQ9HC84 5762 aaPredicted RBP0.95□□□□□ -2.26
RNU1-88P-201ENST00000459274 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.27
RNU1-88P-201ENST00000459274 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
RNU1-88P-201ENST00000459274 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 112.7 ms