RNA–Protein interactions for RNA: ENST00000458604.6

PSMC6-202, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-202ENST00000458604 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.89
PSMC6-202ENST00000458604 A6NN06 94 aa3.27□□□□□ -1.89
PSMC6-202ENST00000458604 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
PSMC6-202ENST00000458604 SERP1Q9Y6X1 66 aa3.23□□□□□ -1.89
PSMC6-202ENST00000458604 INE1O15225 51 aa3.22□□□□□ -1.89
PSMC6-202ENST00000458604 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
PSMC6-202ENST00000458604 H0YAA0 97 aa3.17□□□□□ -1.9
PSMC6-202ENST00000458604 PRR15LQ9BU68 103 aa3.16□□□□□ -1.9
PSMC6-202ENST00000458604 A0A1B0GU69 56 aa3.15□□□□□ -1.91
PSMC6-202ENST00000458604 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
PSMC6-202ENST00000458604 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
PSMC6-202ENST00000458604 MT2AP02795 61 aa3.13□□□□□ -1.91
PSMC6-202ENST00000458604 CRIPTQ9P021 101 aa3.11□□□□□ -1.91
PSMC6-202ENST00000458604 LINC01558Q9Y6Z2 57 aa3.11□□□□□ -1.91
PSMC6-202ENST00000458604 MT1FP04733 61 aa3.1□□□□□ -1.91
PSMC6-202ENST00000458604 M0QZ58 72 aa3.08□□□□□ -1.92
PSMC6-202ENST00000458604 UQCR11O14957 56 aa3.02□□□□□ -1.93
PSMC6-202ENST00000458604 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
PSMC6-202ENST00000458604 SPRR2GQ9BYE4 73 aa3.01□□□□□ -1.93
PSMC6-202ENST00000458604 Q5VV11 94 aa3□□□□□ -1.93
PSMC6-202ENST00000458604 SPATA8Q6RVD6 105 aa3□□□□□ -1.93
PSMC6-202ENST00000458604 A0A0D9SG42 100 aa2.99□□□□□ -1.93
PSMC6-202ENST00000458604 PLAC4Q8WY50 150 aa2.97□□□□□ -1.93
PSMC6-202ENST00000458604 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
PSMC6-202ENST00000458604 FSIP2Q5CZC0 6907 aa2.93□□□□□ -1.94
PSMC6-202ENST00000458604 USH2AO75445 5202 aa2.89□□□□□ -1.95
PSMC6-202ENST00000458604 MT1BP07438 61 aa2.88□□□□□ -1.95
PSMC6-202ENST00000458604 CRCT1Q9UGL9 99 aa2.84□□□□□ -1.95
PSMC6-202ENST00000458604 KRTAP19-6Q3LI70 58 aa2.82□□□□□ -1.96
PSMC6-202ENST00000458604 SSPOA2VEC9 5147 aa2.8□□□□□ -1.96
PSMC6-202ENST00000458604 MT1XP80297 61 aa2.78□□□□□ -1.96
PSMC6-202ENST00000458604 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
PSMC6-202ENST00000458604 TNP1P09430 55 aa2.73□□□□□ -1.97
PSMC6-202ENST00000458604 C10orf95Q9H7T3 257 aa2.71□□□□□ -1.98
PSMC6-202ENST00000458604 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
PSMC6-202ENST00000458604 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
PSMC6-202ENST00000458604 SYNE2Q8WXH0 6885 aaKnown RBP2.64□□□□□ -1.99
PSMC6-202ENST00000458604 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
PSMC6-202ENST00000458604 KMT2DO14686 5537 aa2.58□□□□□ -2
PSMC6-202ENST00000458604 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
PSMC6-202ENST00000458604 SPRR2FQ96RM1 72 aa2.53□□□□□ -2
PSMC6-202ENST00000458604 KRTAP19-5Q3LI72 72 aa2.51□□□□□ -2.01
PSMC6-202ENST00000458604 KRTAP19-7Q3SYF9 63 aa2.47□□□□□ -2.01
PSMC6-202ENST00000458604 NEBP20929 6669 aa2.46□□□□□ -2.02
PSMC6-202ENST00000458604 MT1EP04732 61 aa2.46□□□□□ -2.02
PSMC6-202ENST00000458604 SPRR2EP22531 72 aa2.45□□□□□ -2.02
PSMC6-202ENST00000458604 SPRR2BP35325 72 aa2.45□□□□□ -2.02
PSMC6-202ENST00000458604 SPRR2AP35326 72 aa2.45□□□□□ -2.02
PSMC6-202ENST00000458604 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
PSMC6-202ENST00000458604 MDN1Q9NU22 5596 aa2.43□□□□□ -2.02
PSMC6-202ENST00000458604 KRTAP19-3Q7Z4W3 81 aa2.4□□□□□ -2.03
PSMC6-202ENST00000458604 MT1LQ93083 61 aa2.39□□□□□ -2.03
PSMC6-202ENST00000458604 MT1GP13640 62 aa2.37□□□□□ -2.03
PSMC6-202ENST00000458604 SPRR2DP22532 72 aa2.36□□□□□ -2.03
PSMC6-202ENST00000458604 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
PSMC6-202ENST00000458604 MT1MQ8N339 61 aa2.32□□□□□ -2.04
PSMC6-202ENST00000458604 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
PSMC6-202ENST00000458604 KRTAP20-1Q3LI63 56 aa2.26□□□□□ -2.05
PSMC6-202ENST00000458604 KRTAP2-3P0C7H8 128 aa2.25□□□□□ -2.05
PSMC6-202ENST00000458604 KRTAP2-4Q9BYR9 128 aa2.25□□□□□ -2.05
PSMC6-202ENST00000458604 DSTQ03001 7570 aaKnown RBP2.23□□□□□ -2.05
PSMC6-202ENST00000458604 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
PSMC6-202ENST00000458604 MT1AP04731 61 aa2.05□□□□□ -2.08
PSMC6-202ENST00000458604 MT4P47944 62 aa2.04□□□□□ -2.08
PSMC6-202ENST00000458604 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
PSMC6-202ENST00000458604 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
PSMC6-202ENST00000458604 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
PSMC6-202ENST00000458604 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
PSMC6-202ENST00000458604 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
PSMC6-202ENST00000458604 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
PSMC6-202ENST00000458604 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
PSMC6-202ENST00000458604 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
PSMC6-202ENST00000458604 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
PSMC6-202ENST00000458604 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
PSMC6-202ENST00000458604 PRM1P04553 51 aa1.4□□□□□ -2.19
PSMC6-202ENST00000458604 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
PSMC6-202ENST00000458604 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
PSMC6-202ENST00000458604 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 136 ms