RNA–Protein interactions for RNA: ENST00000458358.5

ITGA6-207, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-207ENST00000458358 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
ITGA6-207ENST00000458358 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
ITGA6-207ENST00000458358 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
ITGA6-207ENST00000458358 CRCT1Q9UGL9 99 aa3.42□□□□□ -1.86
ITGA6-207ENST00000458358 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.86
ITGA6-207ENST00000458358 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.87
ITGA6-207ENST00000458358 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
ITGA6-207ENST00000458358 MT1EP04732 61 aa3.33□□□□□ -1.88
ITGA6-207ENST00000458358 MT1LQ93083 61 aa3.31□□□□□ -1.88
ITGA6-207ENST00000458358 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
ITGA6-207ENST00000458358 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
ITGA6-207ENST00000458358 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
ITGA6-207ENST00000458358 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
ITGA6-207ENST00000458358 KRTAP19-4Q3LI73 84 aa3.22□□□□□ -1.89
ITGA6-207ENST00000458358 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
ITGA6-207ENST00000458358 MT1GP13640 62 aa3.2□□□□□ -1.9
ITGA6-207ENST00000458358 KRTAP9-6A0A140TA67 174 aa3.19□□□□□ -1.9
ITGA6-207ENST00000458358 KRTAP19-3Q7Z4W3 81 aa3.19□□□□□ -1.9
ITGA6-207ENST00000458358 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
ITGA6-207ENST00000458358 SPRR2EP22531 72 aa3.15□□□□□ -1.91
ITGA6-207ENST00000458358 SPRR2BP35325 72 aa3.15□□□□□ -1.91
ITGA6-207ENST00000458358 SPRR2AP35326 72 aa3.15□□□□□ -1.91
ITGA6-207ENST00000458358 MT1MQ8N339 61 aa3.15□□□□□ -1.91
ITGA6-207ENST00000458358 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
ITGA6-207ENST00000458358 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
ITGA6-207ENST00000458358 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
ITGA6-207ENST00000458358 LCE3BQ5TA77 95 aa3.02□□□□□ -1.93
ITGA6-207ENST00000458358 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
ITGA6-207ENST00000458358 SPRR2DP22532 72 aa3.01□□□□□ -1.93
ITGA6-207ENST00000458358 KRTAP5-9P26371 169 aa3□□□□□ -1.93
ITGA6-207ENST00000458358 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
ITGA6-207ENST00000458358 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
ITGA6-207ENST00000458358 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
ITGA6-207ENST00000458358 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
ITGA6-207ENST00000458358 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
ITGA6-207ENST00000458358 PRM1P04553 51 aa2.85□□□□□ -1.95
ITGA6-207ENST00000458358 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
ITGA6-207ENST00000458358 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.96
ITGA6-207ENST00000458358 MT1AP04731 61 aa2.83□□□□□ -1.96
ITGA6-207ENST00000458358 NEBP20929 6669 aa2.83□□□□□ -1.96
ITGA6-207ENST00000458358 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
ITGA6-207ENST00000458358 MT4P47944 62 aa2.76□□□□□ -1.97
ITGA6-207ENST00000458358 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
ITGA6-207ENST00000458358 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
ITGA6-207ENST00000458358 LCE4AQ5TA78 99 aa2.71□□□□□ -1.98
ITGA6-207ENST00000458358 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
ITGA6-207ENST00000458358 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
ITGA6-207ENST00000458358 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
ITGA6-207ENST00000458358 LCE1DQ5T752 114 aa2.6□□□□□ -1.99
ITGA6-207ENST00000458358 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
ITGA6-207ENST00000458358 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
ITGA6-207ENST00000458358 MT3P25713 68 aa2.52□□□□□ -2.01
ITGA6-207ENST00000458358 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
ITGA6-207ENST00000458358 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
ITGA6-207ENST00000458358 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
ITGA6-207ENST00000458358 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
ITGA6-207ENST00000458358 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
ITGA6-207ENST00000458358 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
ITGA6-207ENST00000458358 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
ITGA6-207ENST00000458358 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
ITGA6-207ENST00000458358 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
ITGA6-207ENST00000458358 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
ITGA6-207ENST00000458358 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
ITGA6-207ENST00000458358 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
ITGA6-207ENST00000458358 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
ITGA6-207ENST00000458358 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
ITGA6-207ENST00000458358 KRTAP5-8O75690 187 aa2□□□□□ -2.09
ITGA6-207ENST00000458358 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
ITGA6-207ENST00000458358 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
ITGA6-207ENST00000458358 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
ITGA6-207ENST00000458358 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
ITGA6-207ENST00000458358 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
ITGA6-207ENST00000458358 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
ITGA6-207ENST00000458358 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
ITGA6-207ENST00000458358 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
ITGA6-207ENST00000458358 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
ITGA6-207ENST00000458358 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 101.3 ms