RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 CHKB-CPT1BH3BT56 60 aa5.17□□□□□ -1.58
UPF3AP2-201ENST00000457924 SCGB1A1P11684 91 aa5.16□□□□□ -1.58
UPF3AP2-201ENST00000457924 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
UPF3AP2-201ENST00000457924 KRTAP13-4Q3LI77 160 aa5.15□□□□□ -1.59
UPF3AP2-201ENST00000457924 A0A0D9SG42 100 aa5.14□□□□□ -1.59
UPF3AP2-201ENST00000457924 MT1MQ8N339 61 aa5.13□□□□□ -1.59
UPF3AP2-201ENST00000457924 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
UPF3AP2-201ENST00000457924 KRTAP5-7Q6L8G8 165 aa5.06□□□□□ -1.6
UPF3AP2-201ENST00000457924 MT1LQ93083 61 aa5.05□□□□□ -1.6
UPF3AP2-201ENST00000457924 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
UPF3AP2-201ENST00000457924 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
UPF3AP2-201ENST00000457924 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.62
UPF3AP2-201ENST00000457924 A8MU10 97 aa4.94□□□□□ -1.62
UPF3AP2-201ENST00000457924 KRTAP5-1Q6L8H4 278 aa4.92□□□□□ -1.62
UPF3AP2-201ENST00000457924 SMIM20Q8N5G0 67 aa4.9□□□□□ -1.63
UPF3AP2-201ENST00000457924 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
UPF3AP2-201ENST00000457924 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
UPF3AP2-201ENST00000457924 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
UPF3AP2-201ENST00000457924 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
UPF3AP2-201ENST00000457924 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
UPF3AP2-201ENST00000457924 SERP1Q9Y6X1 66 aa4.86□□□□□ -1.63
UPF3AP2-201ENST00000457924 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
UPF3AP2-201ENST00000457924 SNURFQ9Y675 71 aa4.85□□□□□ -1.63
UPF3AP2-201ENST00000457924 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
UPF3AP2-201ENST00000457924 A0A1B0GU33 70 aa4.79□□□□□ -1.64
UPF3AP2-201ENST00000457924 TNP1P09430 55 aa4.76□□□□□ -1.65
UPF3AP2-201ENST00000457924 COA5Q86WW8 74 aa4.75□□□□□ -1.65
UPF3AP2-201ENST00000457924 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
UPF3AP2-201ENST00000457924 ANAPC13Q9BS18 74 aa4.74□□□□□ -1.65
UPF3AP2-201ENST00000457924 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
UPF3AP2-201ENST00000457924 KRTAP4-4Q9BYR3 166 aa4.69□□□□□ -1.66
UPF3AP2-201ENST00000457924 SERP2Q8N6R1 65 aa4.68□□□□□ -1.66
UPF3AP2-201ENST00000457924 SMIM26A0A096LP01 95 aa4.67□□□□□ -1.66
UPF3AP2-201ENST00000457924 COX7CP15954 63 aa4.66□□□□□ -1.66
UPF3AP2-201ENST00000457924 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
UPF3AP2-201ENST00000457924 PRO0628Q9UI54 55 aa4.66□□□□□ -1.66
UPF3AP2-201ENST00000457924 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
UPF3AP2-201ENST00000457924 CCDC179H3BU77 68 aa4.56□□□□□ -1.68
UPF3AP2-201ENST00000457924 PSPHP1O15172 72 aa4.56□□□□□ -1.68
UPF3AP2-201ENST00000457924 A0A1B0GU69 56 aa4.54□□□□□ -1.68
UPF3AP2-201ENST00000457924 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
UPF3AP2-201ENST00000457924 TMEM258P61165 79 aa4.51□□□□□ -1.69
UPF3AP2-201ENST00000457924 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
UPF3AP2-201ENST00000457924 H7BZZ5 65 aa4.47□□□□□ -1.69
UPF3AP2-201ENST00000457924 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
UPF3AP2-201ENST00000457924 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
UPF3AP2-201ENST00000457924 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
UPF3AP2-201ENST00000457924 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
UPF3AP2-201ENST00000457924 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
UPF3AP2-201ENST00000457924 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
UPF3AP2-201ENST00000457924 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
UPF3AP2-201ENST00000457924 PRR15LQ9BU68 103 aa4.3□□□□□ -1.72
UPF3AP2-201ENST00000457924 MT1AP04731 61 aa4.29□□□□□ -1.72
UPF3AP2-201ENST00000457924 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
UPF3AP2-201ENST00000457924 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
UPF3AP2-201ENST00000457924 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
UPF3AP2-201ENST00000457924 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
UPF3AP2-201ENST00000457924 Q1T7F1 81 aa4.15□□□□□ -1.75
UPF3AP2-201ENST00000457924 UQCR11O14957 56 aa4.13□□□□□ -1.75
UPF3AP2-201ENST00000457924 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
UPF3AP2-201ENST00000457924 K7ERS5 55 aa4.12□□□□□ -1.75
UPF3AP2-201ENST00000457924 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
UPF3AP2-201ENST00000457924 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
UPF3AP2-201ENST00000457924 A6NED7 52 aa4.06□□□□□ -1.76
UPF3AP2-201ENST00000457924 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
UPF3AP2-201ENST00000457924 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
UPF3AP2-201ENST00000457924 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
UPF3AP2-201ENST00000457924 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
UPF3AP2-201ENST00000457924 CDC42SE1Q9NRR8 79 aa3.9□□□□□ -1.79
UPF3AP2-201ENST00000457924 ROMO1P60602 79 aa3.64□□□□□ -1.83
UPF3AP2-201ENST00000457924 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
UPF3AP2-201ENST00000457924 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
UPF3AP2-201ENST00000457924 INE1O15225 51 aa3.04□□□□□ -1.92
UPF3AP2-201ENST00000457924 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
UPF3AP2-201ENST00000457924 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
UPF3AP2-201ENST00000457924 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
UPF3AP2-201ENST00000457924 PRM1P04553 51 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 89 ms