RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
ATG4A-206ENST00000457035 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
ATG4A-206ENST00000457035 SPRR2EP22531 72 aa3.99□□□□□ -1.77
ATG4A-206ENST00000457035 SPRR2BP35325 72 aa3.99□□□□□ -1.77
ATG4A-206ENST00000457035 SPRR2AP35326 72 aa3.99□□□□□ -1.77
ATG4A-206ENST00000457035 Q1T7F1 81 aa3.98□□□□□ -1.77
ATG4A-206ENST00000457035 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
ATG4A-206ENST00000457035 UQCR11O14957 56 aa3.97□□□□□ -1.77
ATG4A-206ENST00000457035 V9GYY9 64 aa3.96□□□□□ -1.78
ATG4A-206ENST00000457035 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
ATG4A-206ENST00000457035 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
ATG4A-206ENST00000457035 PSPHP1O15172 72 aa3.92□□□□□ -1.78
ATG4A-206ENST00000457035 MIR22HGQ0VDD5 57 aa3.89□□□□□ -1.79
ATG4A-206ENST00000457035 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
ATG4A-206ENST00000457035 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
ATG4A-206ENST00000457035 SPRR2DP22532 72 aa3.86□□□□□ -1.79
ATG4A-206ENST00000457035 A6NED7 52 aa3.78□□□□□ -1.8
ATG4A-206ENST00000457035 TNP1P09430 55 aa3.78□□□□□ -1.8
ATG4A-206ENST00000457035 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
ATG4A-206ENST00000457035 K7ERS5 55 aa3.75□□□□□ -1.81
ATG4A-206ENST00000457035 MT1EP04732 61 aa3.72□□□□□ -1.81
ATG4A-206ENST00000457035 KRTAP19-5Q3LI72 72 aa3.72□□□□□ -1.81
ATG4A-206ENST00000457035 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
ATG4A-206ENST00000457035 CDC42SE1Q9NRR8 79 aa3.67□□□□□ -1.82
ATG4A-206ENST00000457035 KRTAP25-1Q3LHN0 102 aa3.66□□□□□ -1.82
ATG4A-206ENST00000457035 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
ATG4A-206ENST00000457035 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
ATG4A-206ENST00000457035 DSTQ03001 7570 aaKnown RBP3.62□□□□□ -1.83
ATG4A-206ENST00000457035 MT1GP13640 62 aa3.6□□□□□ -1.83
ATG4A-206ENST00000457035 MT1LQ93083 61 aa3.59□□□□□ -1.83
ATG4A-206ENST00000457035 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
ATG4A-206ENST00000457035 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
ATG4A-206ENST00000457035 ROMO1P60602 79 aa3.56□□□□□ -1.84
ATG4A-206ENST00000457035 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
ATG4A-206ENST00000457035 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
ATG4A-206ENST00000457035 MT1MQ8N339 61 aa3.53□□□□□ -1.84
ATG4A-206ENST00000457035 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
ATG4A-206ENST00000457035 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
ATG4A-206ENST00000457035 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
ATG4A-206ENST00000457035 BRK1Q8WUW1 75 aa3.44□□□□□ -1.86
ATG4A-206ENST00000457035 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
ATG4A-206ENST00000457035 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
ATG4A-206ENST00000457035 MT4P47944 62 aa3.41□□□□□ -1.86
ATG4A-206ENST00000457035 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
ATG4A-206ENST00000457035 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
ATG4A-206ENST00000457035 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
ATG4A-206ENST00000457035 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
ATG4A-206ENST00000457035 PMAIP1Q13794 54 aa3.26□□□□□ -1.89
ATG4A-206ENST00000457035 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
ATG4A-206ENST00000457035 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
ATG4A-206ENST00000457035 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
ATG4A-206ENST00000457035 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
ATG4A-206ENST00000457035 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
ATG4A-206ENST00000457035 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
ATG4A-206ENST00000457035 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
ATG4A-206ENST00000457035 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
ATG4A-206ENST00000457035 KTN1-AS1Q86SY8 53 aa3.08□□□□□ -1.92
ATG4A-206ENST00000457035 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
ATG4A-206ENST00000457035 MT1AP04731 61 aa3.05□□□□□ -1.92
ATG4A-206ENST00000457035 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
ATG4A-206ENST00000457035 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
ATG4A-206ENST00000457035 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
ATG4A-206ENST00000457035 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
ATG4A-206ENST00000457035 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
ATG4A-206ENST00000457035 LUZP6Q538Z0 58 aa2.72□□□□□ -1.97
ATG4A-206ENST00000457035 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
ATG4A-206ENST00000457035 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
ATG4A-206ENST00000457035 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
ATG4A-206ENST00000457035 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
ATG4A-206ENST00000457035 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
ATG4A-206ENST00000457035 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
ATG4A-206ENST00000457035 INE1O15225 51 aa2.14□□□□□ -2.07
ATG4A-206ENST00000457035 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
ATG4A-206ENST00000457035 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
ATG4A-206ENST00000457035 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
ATG4A-206ENST00000457035 PRM1P04553 51 aa1.83□□□□□ -2.12
ATG4A-206ENST00000457035 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
ATG4A-206ENST00000457035 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 112.6 ms