RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 PRO2289Q9P1D8 64 aa3.9□□□□□ -1.79
PTCHD1-202ENST00000456522 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
PTCHD1-202ENST00000456522 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
PTCHD1-202ENST00000456522 K7ERS5 55 aa3.87□□□□□ -1.79
PTCHD1-202ENST00000456522 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
PTCHD1-202ENST00000456522 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
PTCHD1-202ENST00000456522 BRK1Q8WUW1 75 aa3.81□□□□□ -1.8
PTCHD1-202ENST00000456522 C10orf95Q9H7T3 257 aa3.78□□□□□ -1.8
PTCHD1-202ENST00000456522 TNP1P09430 55 aa3.69□□□□□ -1.82
PTCHD1-202ENST00000456522 ROMO1P60602 79 aa3.67□□□□□ -1.82
PTCHD1-202ENST00000456522 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
PTCHD1-202ENST00000456522 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
PTCHD1-202ENST00000456522 KMT2DO14686 5537 aa3.62□□□□□ -1.83
PTCHD1-202ENST00000456522 KRTAP8-1Q8IUC2 63 aa3.62□□□□□ -1.83
PTCHD1-202ENST00000456522 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
PTCHD1-202ENST00000456522 PMAIP1Q13794 54 aa3.59□□□□□ -1.83
PTCHD1-202ENST00000456522 PRO0628Q9UI54 55 aa3.59□□□□□ -1.83
PTCHD1-202ENST00000456522 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
PTCHD1-202ENST00000456522 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
PTCHD1-202ENST00000456522 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
PTCHD1-202ENST00000456522 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
PTCHD1-202ENST00000456522 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
PTCHD1-202ENST00000456522 KRTAP19-5Q3LI72 72 aa3.51□□□□□ -1.85
PTCHD1-202ENST00000456522 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
PTCHD1-202ENST00000456522 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
PTCHD1-202ENST00000456522 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
PTCHD1-202ENST00000456522 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
PTCHD1-202ENST00000456522 MT1EP04732 61 aa3.44□□□□□ -1.86
PTCHD1-202ENST00000456522 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
PTCHD1-202ENST00000456522 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
PTCHD1-202ENST00000456522 MUC12Q9UKN1 5478 aa3.43□□□□□ -1.86
PTCHD1-202ENST00000456522 SPRR2EP22531 72 aa3.42□□□□□ -1.86
PTCHD1-202ENST00000456522 SPRR2BP35325 72 aa3.42□□□□□ -1.86
PTCHD1-202ENST00000456522 SPRR2AP35326 72 aa3.42□□□□□ -1.86
PTCHD1-202ENST00000456522 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
PTCHD1-202ENST00000456522 MDN1Q9NU22 5596 aa3.37□□□□□ -1.87
PTCHD1-202ENST00000456522 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
PTCHD1-202ENST00000456522 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
PTCHD1-202ENST00000456522 MT1LQ93083 61 aa3.34□□□□□ -1.87
PTCHD1-202ENST00000456522 NEBP20929 6669 aa3.33□□□□□ -1.88
PTCHD1-202ENST00000456522 MT1GP13640 62 aa3.29□□□□□ -1.88
PTCHD1-202ENST00000456522 SPRR2DP22532 72 aa3.29□□□□□ -1.88
PTCHD1-202ENST00000456522 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
PTCHD1-202ENST00000456522 MT1MQ8N339 61 aa3.26□□□□□ -1.89
PTCHD1-202ENST00000456522 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
PTCHD1-202ENST00000456522 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
PTCHD1-202ENST00000456522 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
PTCHD1-202ENST00000456522 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
PTCHD1-202ENST00000456522 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
PTCHD1-202ENST00000456522 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
PTCHD1-202ENST00000456522 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
PTCHD1-202ENST00000456522 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
PTCHD1-202ENST00000456522 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
PTCHD1-202ENST00000456522 MT4P47944 62 aa2.87□□□□□ -1.95
PTCHD1-202ENST00000456522 MT1AP04731 61 aa2.85□□□□□ -1.95
PTCHD1-202ENST00000456522 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
PTCHD1-202ENST00000456522 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
PTCHD1-202ENST00000456522 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
PTCHD1-202ENST00000456522 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
PTCHD1-202ENST00000456522 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
PTCHD1-202ENST00000456522 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
PTCHD1-202ENST00000456522 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
PTCHD1-202ENST00000456522 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
PTCHD1-202ENST00000456522 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
PTCHD1-202ENST00000456522 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
PTCHD1-202ENST00000456522 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
PTCHD1-202ENST00000456522 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
PTCHD1-202ENST00000456522 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
PTCHD1-202ENST00000456522 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
PTCHD1-202ENST00000456522 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
PTCHD1-202ENST00000456522 INE1O15225 51 aa2.11□□□□□ -2.07
PTCHD1-202ENST00000456522 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
PTCHD1-202ENST00000456522 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
PTCHD1-202ENST00000456522 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
PTCHD1-202ENST00000456522 PRM1P04553 51 aa1.91□□□□□ -2.1
PTCHD1-202ENST00000456522 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
PTCHD1-202ENST00000456522 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
PTCHD1-202ENST00000456522 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 60 ms