RNA–Protein interactions for RNA: ENST00000456458.5

NT5C3A-208, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best)

Gene NT5C3A, Length 1,742 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-208ENST00000456458 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
NT5C3A-208ENST00000456458 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
NT5C3A-208ENST00000456458 LCE3CQ5T5A8 94 aa5.41□□□□□ -1.54
NT5C3A-208ENST00000456458 INE1O15225 51 aa5.38□□□□□ -1.55
NT5C3A-208ENST00000456458 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
NT5C3A-208ENST00000456458 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
NT5C3A-208ENST00000456458 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
NT5C3A-208ENST00000456458 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
NT5C3A-208ENST00000456458 USH2AO75445 5202 aa5.18□□□□□ -1.58
NT5C3A-208ENST00000456458 MT1EP04732 61 aa5.11□□□□□ -1.59
NT5C3A-208ENST00000456458 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
NT5C3A-208ENST00000456458 MT1LQ93083 61 aa5.11□□□□□ -1.59
NT5C3A-208ENST00000456458 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
NT5C3A-208ENST00000456458 KMT2DO14686 5537 aa5.09□□□□□ -1.6
NT5C3A-208ENST00000456458 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
NT5C3A-208ENST00000456458 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
NT5C3A-208ENST00000456458 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
NT5C3A-208ENST00000456458 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
NT5C3A-208ENST00000456458 MT1GP13640 62 aa4.83□□□□□ -1.64
NT5C3A-208ENST00000456458 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
NT5C3A-208ENST00000456458 MT1MQ8N339 61 aa4.78□□□□□ -1.64
NT5C3A-208ENST00000456458 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
NT5C3A-208ENST00000456458 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
NT5C3A-208ENST00000456458 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
NT5C3A-208ENST00000456458 SPRR2FQ96RM1 72 aa4.6□□□□□ -1.67
NT5C3A-208ENST00000456458 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
NT5C3A-208ENST00000456458 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
NT5C3A-208ENST00000456458 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
NT5C3A-208ENST00000456458 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
NT5C3A-208ENST00000456458 MT1AP04731 61 aa4.36□□□□□ -1.71
NT5C3A-208ENST00000456458 KRTAP5-9P26371 169 aa4.34□□□□□ -1.71
NT5C3A-208ENST00000456458 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
NT5C3A-208ENST00000456458 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
NT5C3A-208ENST00000456458 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
NT5C3A-208ENST00000456458 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
NT5C3A-208ENST00000456458 SPRR2EP22531 72 aa4.21□□□□□ -1.73
NT5C3A-208ENST00000456458 SPRR2BP35325 72 aa4.21□□□□□ -1.73
NT5C3A-208ENST00000456458 SPRR2AP35326 72 aa4.21□□□□□ -1.73
NT5C3A-208ENST00000456458 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
NT5C3A-208ENST00000456458 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
NT5C3A-208ENST00000456458 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
NT5C3A-208ENST00000456458 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
NT5C3A-208ENST00000456458 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
NT5C3A-208ENST00000456458 SPRR2DP22532 72 aa4.05□□□□□ -1.76
NT5C3A-208ENST00000456458 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
NT5C3A-208ENST00000456458 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
NT5C3A-208ENST00000456458 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
NT5C3A-208ENST00000456458 MT3P25713 68 aa3.92□□□□□ -1.78
NT5C3A-208ENST00000456458 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.78
NT5C3A-208ENST00000456458 PRM1P04553 51 aa3.87□□□□□ -1.79
NT5C3A-208ENST00000456458 KRTAP6-2Q3LI66 62 aa3.85□□□□□ -1.79
NT5C3A-208ENST00000456458 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
NT5C3A-208ENST00000456458 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
NT5C3A-208ENST00000456458 NEBP20929 6669 aa3.59□□□□□ -1.83
NT5C3A-208ENST00000456458 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
NT5C3A-208ENST00000456458 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
NT5C3A-208ENST00000456458 MT4P47944 62 aa3.49□□□□□ -1.85
NT5C3A-208ENST00000456458 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
NT5C3A-208ENST00000456458 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
NT5C3A-208ENST00000456458 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
NT5C3A-208ENST00000456458 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
NT5C3A-208ENST00000456458 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
NT5C3A-208ENST00000456458 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
NT5C3A-208ENST00000456458 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
NT5C3A-208ENST00000456458 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
NT5C3A-208ENST00000456458 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
NT5C3A-208ENST00000456458 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
NT5C3A-208ENST00000456458 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
NT5C3A-208ENST00000456458 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
NT5C3A-208ENST00000456458 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
NT5C3A-208ENST00000456458 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
NT5C3A-208ENST00000456458 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
NT5C3A-208ENST00000456458 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
NT5C3A-208ENST00000456458 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
NT5C3A-208ENST00000456458 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
NT5C3A-208ENST00000456458 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
NT5C3A-208ENST00000456458 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
NT5C3A-208ENST00000456458 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 101.4 ms