RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 A0A1B0GU69 56 aa7.6□□□□□ -1.19
SEC22C-213ENST00000456222 AHNAK2Q8IVF2 5795 aa7.55□□□□□ -1.2
SEC22C-213ENST00000456222 TMEM258P61165 79 aa7.52□□□□□ -1.21
SEC22C-213ENST00000456222 KRTAP5-4Q6L8H1 288 aa7.52□□□□□ -1.21
SEC22C-213ENST00000456222 TNP1P09430 55 aa7.5□□□□□ -1.21
SEC22C-213ENST00000456222 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
SEC22C-213ENST00000456222 KRTAP4-6Q9BYQ5 205 aa7.45□□□□□ -1.22
SEC22C-213ENST00000456222 KRTAP4-7Q9BYR0 210 aa7.42□□□□□ -1.22
SEC22C-213ENST00000456222 KRTAP5-10Q6L8G5 202 aa7.33□□□□□ -1.24
SEC22C-213ENST00000456222 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
SEC22C-213ENST00000456222 PRR15LQ9BU68 103 aa7.24□□□□□ -1.25
SEC22C-213ENST00000456222 LINC01558Q9Y6Z2 57 aa7.21□□□□□ -1.26
SEC22C-213ENST00000456222 RPS28P62857 69 aaKnown RBP7.2□□□□□ -1.26
SEC22C-213ENST00000456222 KRTAP5-5Q701N2 237 aaPredicted RBP7.15□□□□□ -1.26
SEC22C-213ENST00000456222 KRTAP20-2Q3LI61 65 aa7.11□□□□□ -1.27
SEC22C-213ENST00000456222 KRTAP5-3Q6L8H2 238 aa7.11□□□□□ -1.27
SEC22C-213ENST00000456222 KRTAP5-7Q6L8G8 165 aa7.05□□□□□ -1.28
SEC22C-213ENST00000456222 LOC100996750A0A140TA64 210 aa7.04□□□□□ -1.28
SEC22C-213ENST00000456222 UQCR11O14957 56 aa7.03□□□□□ -1.28
SEC22C-213ENST00000456222 SPRR5A0A1B0GTR4 108 aa7□□□□□ -1.29
SEC22C-213ENST00000456222 SYNE1Q8NF91 8797 aaKnown RBP6.99□□□□□ -1.29
SEC22C-213ENST00000456222 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.3
SEC22C-213ENST00000456222 Q1T7F1 81 aa6.95□□□□□ -1.3
SEC22C-213ENST00000456222 KRTAP12-4P60329 112 aa6.93□□□□□ -1.3
SEC22C-213ENST00000456222 V9GYY9 64 aa6.93□□□□□ -1.3
SEC22C-213ENST00000456222 MIR22HGQ0VDD5 57 aa6.88□□□□□ -1.31
SEC22C-213ENST00000456222 PSPHP1O15172 72 aa6.8□□□□□ -1.32
SEC22C-213ENST00000456222 KRTAP19-4Q3LI73 84 aa6.74□□□□□ -1.33
SEC22C-213ENST00000456222 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
SEC22C-213ENST00000456222 K7ERS5 55 aa6.71□□□□□ -1.34
SEC22C-213ENST00000456222 LCE3CQ5T5A8 94 aa6.71□□□□□ -1.34
SEC22C-213ENST00000456222 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
SEC22C-213ENST00000456222 A6NED7 52 aa6.6□□□□□ -1.35
SEC22C-213ENST00000456222 KRTAP6-1Q3LI64 71 aa6.58□□□□□ -1.36
SEC22C-213ENST00000456222 KRTAP5-2Q701N4 177 aa6.56□□□□□ -1.36
SEC22C-213ENST00000456222 MT1AP04731 61 aa6.55□□□□□ -1.36
SEC22C-213ENST00000456222 KRTAP4-11Q9BYQ6 195 aa6.53□□□□□ -1.36
SEC22C-213ENST00000456222 CDC42SE1Q9NRR8 79 aa6.5□□□□□ -1.37
SEC22C-213ENST00000456222 BRK1Q8WUW1 75 aa6.45□□□□□ -1.38
SEC22C-213ENST00000456222 KRTAP9-6A8MVA2 160 aa6.44□□□□□ -1.38
SEC22C-213ENST00000456222 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
SEC22C-213ENST00000456222 KRTAP5-8O75690 187 aa6.35□□□□□ -1.39
SEC22C-213ENST00000456222 OBSCNQ5VST9 7968 aa6.32□□□□□ -1.4
SEC22C-213ENST00000456222 KRTAP6-2Q3LI66 62 aa6.32□□□□□ -1.4
SEC22C-213ENST00000456222 ROMO1P60602 79 aa6.29□□□□□ -1.4
SEC22C-213ENST00000456222 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
SEC22C-213ENST00000456222 AHNAKQ09666 5890 aaKnown RBP6.23□□□□□ -1.41
SEC22C-213ENST00000456222 MUC5ACP98088 5654 aa6.21□□□□□ -1.42
SEC22C-213ENST00000456222 MUC5BQ9HC84 5762 aaPredicted RBP6.2□□□□□ -1.42
SEC22C-213ENST00000456222 PMAIP1Q13794 54 aa6.08□□□□□ -1.44
SEC22C-213ENST00000456222 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
SEC22C-213ENST00000456222 MT3P25713 68 aa5.97□□□□□ -1.45
SEC22C-213ENST00000456222 KRTAP5-1Q6L8H4 278 aa5.93□□□□□ -1.46
SEC22C-213ENST00000456222 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
SEC22C-213ENST00000456222 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
SEC22C-213ENST00000456222 LCE1EQ5T753 118 aa5.53□□□□□ -1.52
SEC22C-213ENST00000456222 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
SEC22C-213ENST00000456222 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
SEC22C-213ENST00000456222 LCE1BQ5T7P3 118 aa5.28□□□□□ -1.56
SEC22C-213ENST00000456222 LCE1CQ5T751 118 aa5.15□□□□□ -1.59
SEC22C-213ENST00000456222 KRTAP4-12Q9BQ66 201 aa4.93□□□□□ -1.62
SEC22C-213ENST00000456222 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
SEC22C-213ENST00000456222 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
SEC22C-213ENST00000456222 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.66□□□□□ -1.66
SEC22C-213ENST00000456222 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
SEC22C-213ENST00000456222 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
SEC22C-213ENST00000456222 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
SEC22C-213ENST00000456222 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
SEC22C-213ENST00000456222 KRTAP21-2Q3LI59 83 aa4.34□□□□□ -1.71
SEC22C-213ENST00000456222 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
SEC22C-213ENST00000456222 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
SEC22C-213ENST00000456222 MUC19Q7Z5P9 8384 aa3.92□□□□□ -1.78
SEC22C-213ENST00000456222 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
SEC22C-213ENST00000456222 H3BS24 57 aa3.74□□□□□ -1.81
SEC22C-213ENST00000456222 INE1O15225 51 aa3.72□□□□□ -1.81
SEC22C-213ENST00000456222 PRM1P04553 51 aa3.24□□□□□ -1.89
SEC22C-213ENST00000456222 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
SEC22C-213ENST00000456222 MUC16Q8WXI7 14507 aa2.7□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 36.5 ms