RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 SPRR2FQ96RM1 72 aa5.35□□□□□ -1.55
GTF2IRD1-203ENST00000455841 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
GTF2IRD1-203ENST00000455841 MT1LQ93083 61 aa5.32□□□□□ -1.56
GTF2IRD1-203ENST00000455841 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
GTF2IRD1-203ENST00000455841 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
GTF2IRD1-203ENST00000455841 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
GTF2IRD1-203ENST00000455841 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
GTF2IRD1-203ENST00000455841 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
GTF2IRD1-203ENST00000455841 MT1GP13640 62 aa5.18□□□□□ -1.58
GTF2IRD1-203ENST00000455841 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.59
GTF2IRD1-203ENST00000455841 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
GTF2IRD1-203ENST00000455841 MT1MQ8N339 61 aa5.07□□□□□ -1.6
GTF2IRD1-203ENST00000455841 SPRR2EP22531 72 aa4.92□□□□□ -1.62
GTF2IRD1-203ENST00000455841 SPRR2BP35325 72 aa4.92□□□□□ -1.62
GTF2IRD1-203ENST00000455841 SPRR2AP35326 72 aa4.92□□□□□ -1.62
GTF2IRD1-203ENST00000455841 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
GTF2IRD1-203ENST00000455841 LCE5AQ5TCM9 118 aa4.89□□□□□ -1.63
GTF2IRD1-203ENST00000455841 INE1O15225 51 aa4.87□□□□□ -1.63
GTF2IRD1-203ENST00000455841 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
GTF2IRD1-203ENST00000455841 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
GTF2IRD1-203ENST00000455841 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
GTF2IRD1-203ENST00000455841 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
GTF2IRD1-203ENST00000455841 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
GTF2IRD1-203ENST00000455841 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
GTF2IRD1-203ENST00000455841 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
GTF2IRD1-203ENST00000455841 SPRR2DP22532 72 aa4.69□□□□□ -1.66
GTF2IRD1-203ENST00000455841 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
GTF2IRD1-203ENST00000455841 KRTAP4-9Q9BYQ8 210 aa4.65□□□□□ -1.66
GTF2IRD1-203ENST00000455841 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
GTF2IRD1-203ENST00000455841 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
GTF2IRD1-203ENST00000455841 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
GTF2IRD1-203ENST00000455841 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
GTF2IRD1-203ENST00000455841 MT1AP04731 61 aa4.43□□□□□ -1.7
GTF2IRD1-203ENST00000455841 NEBP20929 6669 aa4.41□□□□□ -1.7
GTF2IRD1-203ENST00000455841 MT4P47944 62 aa4.31□□□□□ -1.72
GTF2IRD1-203ENST00000455841 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
GTF2IRD1-203ENST00000455841 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
GTF2IRD1-203ENST00000455841 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
GTF2IRD1-203ENST00000455841 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
GTF2IRD1-203ENST00000455841 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
GTF2IRD1-203ENST00000455841 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
GTF2IRD1-203ENST00000455841 MT3P25713 68 aa4.06□□□□□ -1.76
GTF2IRD1-203ENST00000455841 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
GTF2IRD1-203ENST00000455841 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
GTF2IRD1-203ENST00000455841 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
GTF2IRD1-203ENST00000455841 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.78
GTF2IRD1-203ENST00000455841 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
GTF2IRD1-203ENST00000455841 PRM1P04553 51 aa3.89□□□□□ -1.79
GTF2IRD1-203ENST00000455841 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
GTF2IRD1-203ENST00000455841 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
GTF2IRD1-203ENST00000455841 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
GTF2IRD1-203ENST00000455841 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
GTF2IRD1-203ENST00000455841 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
GTF2IRD1-203ENST00000455841 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
GTF2IRD1-203ENST00000455841 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
GTF2IRD1-203ENST00000455841 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
GTF2IRD1-203ENST00000455841 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
GTF2IRD1-203ENST00000455841 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
GTF2IRD1-203ENST00000455841 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
GTF2IRD1-203ENST00000455841 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
GTF2IRD1-203ENST00000455841 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
GTF2IRD1-203ENST00000455841 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
GTF2IRD1-203ENST00000455841 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
GTF2IRD1-203ENST00000455841 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
GTF2IRD1-203ENST00000455841 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
GTF2IRD1-203ENST00000455841 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
GTF2IRD1-203ENST00000455841 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
GTF2IRD1-203ENST00000455841 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
GTF2IRD1-203ENST00000455841 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
GTF2IRD1-203ENST00000455841 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
GTF2IRD1-203ENST00000455841 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
GTF2IRD1-203ENST00000455841 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
GTF2IRD1-203ENST00000455841 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
GTF2IRD1-203ENST00000455841 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
GTF2IRD1-203ENST00000455841 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
GTF2IRD1-203ENST00000455841 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
GTF2IRD1-203ENST00000455841 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms