RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
MSH6-206ENST00000455383 SPRR5A0A1B0GTR4 108 aa6.24□□□□□ -1.41
MSH6-206ENST00000455383 KRTAP5-5Q701N2 237 aaPredicted RBP6.22□□□□□ -1.41
MSH6-206ENST00000455383 TNP1P09430 55 aa6.2□□□□□ -1.42
MSH6-206ENST00000455383 SERP2Q8N6R1 65 aa6.13□□□□□ -1.43
MSH6-206ENST00000455383 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
MSH6-206ENST00000455383 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
MSH6-206ENST00000455383 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
MSH6-206ENST00000455383 A8MU10 97 aa6.08□□□□□ -1.44
MSH6-206ENST00000455383 SYNE1Q8NF91 8797 aaKnown RBP6.03□□□□□ -1.44
MSH6-206ENST00000455383 K7ERU9 68 aa6.01□□□□□ -1.45
MSH6-206ENST00000455383 KRTAP4-12Q9BQ66 201 aa5.99□□□□□ -1.45
MSH6-206ENST00000455383 A0A1B0GU69 56 aa5.96□□□□□ -1.46
MSH6-206ENST00000455383 KRTAP4-11Q9BYQ6 195 aa5.86□□□□□ -1.47
MSH6-206ENST00000455383 H7BZZ5 65 aa5.85□□□□□ -1.47
MSH6-206ENST00000455383 COX7CP15954 63 aa5.8□□□□□ -1.48
MSH6-206ENST00000455383 KRTAP5-2Q701N4 177 aa5.78□□□□□ -1.48
MSH6-206ENST00000455383 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
MSH6-206ENST00000455383 KRTAP9-9Q9BYP9 154 aa5.76□□□□□ -1.49
MSH6-206ENST00000455383 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
MSH6-206ENST00000455383 AHNAKQ09666 5890 aaKnown RBP5.69□□□□□ -1.5
MSH6-206ENST00000455383 KRTAP5-8O75690 187 aa5.69□□□□□ -1.5
MSH6-206ENST00000455383 MUC5ACP98088 5654 aa5.67□□□□□ -1.5
MSH6-206ENST00000455383 MUC5BQ9HC84 5762 aaPredicted RBP5.64□□□□□ -1.51
MSH6-206ENST00000455383 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
MSH6-206ENST00000455383 MT1AP04731 61 aa5.62□□□□□ -1.51
MSH6-206ENST00000455383 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
MSH6-206ENST00000455383 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
MSH6-206ENST00000455383 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
MSH6-206ENST00000455383 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
MSH6-206ENST00000455383 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
MSH6-206ENST00000455383 UQCR11O14957 56 aa5.45□□□□□ -1.54
MSH6-206ENST00000455383 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
MSH6-206ENST00000455383 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
MSH6-206ENST00000455383 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
MSH6-206ENST00000455383 ATP5EP56381 51 aaPredicted RBP5.32□□□□□ -1.56
MSH6-206ENST00000455383 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
MSH6-206ENST00000455383 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
MSH6-206ENST00000455383 ANAPC13Q9BS18 74 aa5.28□□□□□ -1.56
MSH6-206ENST00000455383 KRTAP5-1Q6L8H4 278 aa5.26□□□□□ -1.57
MSH6-206ENST00000455383 CCDC179H3BU77 68 aa5.24□□□□□ -1.57
MSH6-206ENST00000455383 K7ERS5 55 aa5.23□□□□□ -1.57
MSH6-206ENST00000455383 MT3P25713 68 aa5.15□□□□□ -1.59
MSH6-206ENST00000455383 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
MSH6-206ENST00000455383 TMEM258P61165 79 aa5□□□□□ -1.61
MSH6-206ENST00000455383 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
MSH6-206ENST00000455383 Q1T7F1 81 aa4.93□□□□□ -1.62
MSH6-206ENST00000455383 CDC42SE1Q9NRR8 79 aa4.92□□□□□ -1.62
MSH6-206ENST00000455383 PSPHP1O15172 72 aa4.9□□□□□ -1.63
MSH6-206ENST00000455383 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
MSH6-206ENST00000455383 ROMO1P60602 79 aa4.83□□□□□ -1.64
MSH6-206ENST00000455383 V9GYY9 64 aa4.83□□□□□ -1.64
MSH6-206ENST00000455383 A6NED7 52 aa4.68□□□□□ -1.66
MSH6-206ENST00000455383 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
MSH6-206ENST00000455383 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
MSH6-206ENST00000455383 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
MSH6-206ENST00000455383 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
MSH6-206ENST00000455383 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
MSH6-206ENST00000455383 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
MSH6-206ENST00000455383 PCP4P48539 62 aa4.12□□□□□ -1.75
MSH6-206ENST00000455383 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
MSH6-206ENST00000455383 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
MSH6-206ENST00000455383 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
MSH6-206ENST00000455383 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
MSH6-206ENST00000455383 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
MSH6-206ENST00000455383 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
MSH6-206ENST00000455383 BRK1Q8WUW1 75 aa3.42□□□□□ -1.86
MSH6-206ENST00000455383 PRAC1Q96KF2 57 aa3.4□□□□□ -1.87
MSH6-206ENST00000455383 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
MSH6-206ENST00000455383 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
MSH6-206ENST00000455383 PMAIP1Q13794 54 aa3.18□□□□□ -1.9
MSH6-206ENST00000455383 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
MSH6-206ENST00000455383 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
MSH6-206ENST00000455383 KTN1-AS1Q86SY8 53 aa2.49□□□□□ -2.01
MSH6-206ENST00000455383 PRO0628Q9UI54 55 aa2.45□□□□□ -2.02
MSH6-206ENST00000455383 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
MSH6-206ENST00000455383 PRM1P04553 51 aa2.43□□□□□ -2.02
MSH6-206ENST00000455383 INE1O15225 51 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 245 ms