RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
LINC01940-201ENST00000455228 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
LINC01940-201ENST00000455228 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
LINC01940-201ENST00000455228 SSPOA2VEC9 5147 aa3.2□□□□□ -1.9
LINC01940-201ENST00000455228 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
LINC01940-201ENST00000455228 CRCT1Q9UGL9 99 aa3.19□□□□□ -1.9
LINC01940-201ENST00000455228 MT1LQ93083 61 aa3.17□□□□□ -1.9
LINC01940-201ENST00000455228 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
LINC01940-201ENST00000455228 MT1EP04732 61 aa3.14□□□□□ -1.91
LINC01940-201ENST00000455228 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
LINC01940-201ENST00000455228 MACF1Q9UPN3 7388 aaKnown RBP3.1□□□□□ -1.91
LINC01940-201ENST00000455228 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
LINC01940-201ENST00000455228 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.92
LINC01940-201ENST00000455228 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
LINC01940-201ENST00000455228 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
LINC01940-201ENST00000455228 LOC100996750A0A140TA64 210 aa3.04□□□□□ -1.92
LINC01940-201ENST00000455228 MT1GP13640 62 aa3.03□□□□□ -1.92
LINC01940-201ENST00000455228 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
LINC01940-201ENST00000455228 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
LINC01940-201ENST00000455228 KRTAP9-7A8MTY7 169 aa2.94□□□□□ -1.94
LINC01940-201ENST00000455228 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
LINC01940-201ENST00000455228 MT1MQ8N339 61 aa2.94□□□□□ -1.94
LINC01940-201ENST00000455228 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
LINC01940-201ENST00000455228 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
LINC01940-201ENST00000455228 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
LINC01940-201ENST00000455228 MT1AP04731 61 aa2.91□□□□□ -1.94
LINC01940-201ENST00000455228 SPRR2FQ96RM1 72 aa2.91□□□□□ -1.94
LINC01940-201ENST00000455228 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.9□□□□□ -1.94
LINC01940-201ENST00000455228 MDN1Q9NU22 5596 aa2.89□□□□□ -1.95
LINC01940-201ENST00000455228 LCE3BQ5TA77 95 aa2.86□□□□□ -1.95
LINC01940-201ENST00000455228 PRM1P04553 51 aa2.85□□□□□ -1.95
LINC01940-201ENST00000455228 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
LINC01940-201ENST00000455228 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
LINC01940-201ENST00000455228 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
LINC01940-201ENST00000455228 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
LINC01940-201ENST00000455228 SPRR2EP22531 72 aa2.76□□□□□ -1.97
LINC01940-201ENST00000455228 SPRR2BP35325 72 aa2.76□□□□□ -1.97
LINC01940-201ENST00000455228 SPRR2AP35326 72 aa2.76□□□□□ -1.97
LINC01940-201ENST00000455228 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
LINC01940-201ENST00000455228 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.97
LINC01940-201ENST00000455228 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
LINC01940-201ENST00000455228 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
LINC01940-201ENST00000455228 SPRR2DP22532 72 aa2.63□□□□□ -1.99
LINC01940-201ENST00000455228 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
LINC01940-201ENST00000455228 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
LINC01940-201ENST00000455228 LCE4AQ5TA78 99 aa2.56□□□□□ -2
LINC01940-201ENST00000455228 MT3P25713 68 aa2.53□□□□□ -2
LINC01940-201ENST00000455228 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
LINC01940-201ENST00000455228 NEBP20929 6669 aa2.52□□□□□ -2.01
LINC01940-201ENST00000455228 MT4P47944 62 aa2.46□□□□□ -2.02
LINC01940-201ENST00000455228 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
LINC01940-201ENST00000455228 KRTAP4-6Q9BYQ5 205 aa2.25□□□□□ -2.05
LINC01940-201ENST00000455228 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
LINC01940-201ENST00000455228 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
LINC01940-201ENST00000455228 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
LINC01940-201ENST00000455228 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
LINC01940-201ENST00000455228 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
LINC01940-201ENST00000455228 KRTAP4-11Q9BYQ6 195 aa2.05□□□□□ -2.08
LINC01940-201ENST00000455228 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
LINC01940-201ENST00000455228 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
LINC01940-201ENST00000455228 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
LINC01940-201ENST00000455228 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
LINC01940-201ENST00000455228 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
LINC01940-201ENST00000455228 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
LINC01940-201ENST00000455228 KRTAP5-3Q6L8H2 238 aa1.94□□□□□ -2.1
LINC01940-201ENST00000455228 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
LINC01940-201ENST00000455228 KRTAP4-12Q9BQ66 201 aa1.86□□□□□ -2.11
LINC01940-201ENST00000455228 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
LINC01940-201ENST00000455228 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
LINC01940-201ENST00000455228 KRTAP4-2Q9BYR5 136 aa1.78□□□□□ -2.12
LINC01940-201ENST00000455228 KRTAP5-8O75690 187 aa1.78□□□□□ -2.13
LINC01940-201ENST00000455228 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
LINC01940-201ENST00000455228 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.14
LINC01940-201ENST00000455228 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
LINC01940-201ENST00000455228 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
LINC01940-201ENST00000455228 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
LINC01940-201ENST00000455228 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 62.7 ms