RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 A0A1B0GU33 70 aa5.61□□□□□ -1.51
GPC1-206ENST00000455111 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
GPC1-206ENST00000455111 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
GPC1-206ENST00000455111 SEC61GP60059 68 aa5.57□□□□□ -1.52
GPC1-206ENST00000455111 V9GYY9 64 aa5.57□□□□□ -1.52
GPC1-206ENST00000455111 Q1T7F1 81 aa5.56□□□□□ -1.52
GPC1-206ENST00000455111 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
GPC1-206ENST00000455111 LINC01558Q9Y6Z2 57 aa5.56□□□□□ -1.52
GPC1-206ENST00000455111 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
GPC1-206ENST00000455111 A8MU10 97 aa5.53□□□□□ -1.52
GPC1-206ENST00000455111 PRR15LQ9BU68 103 aa5.51□□□□□ -1.53
GPC1-206ENST00000455111 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
GPC1-206ENST00000455111 A0A1B0GU69 56 aa5.5□□□□□ -1.53
GPC1-206ENST00000455111 PSPHP1O15172 72 aa5.42□□□□□ -1.54
GPC1-206ENST00000455111 TNP1P09430 55 aa5.38□□□□□ -1.55
GPC1-206ENST00000455111 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
GPC1-206ENST00000455111 UQCR11O14957 56 aa5.34□□□□□ -1.55
GPC1-206ENST00000455111 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
GPC1-206ENST00000455111 KRTAP5-7Q6L8G8 165 aa5.32□□□□□ -1.56
GPC1-206ENST00000455111 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
GPC1-206ENST00000455111 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
GPC1-206ENST00000455111 A6NED7 52 aa5.24□□□□□ -1.57
GPC1-206ENST00000455111 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
GPC1-206ENST00000455111 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
GPC1-206ENST00000455111 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
GPC1-206ENST00000455111 SYNE1Q8NF91 8797 aaKnown RBP5.2□□□□□ -1.58
GPC1-206ENST00000455111 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
GPC1-206ENST00000455111 BRK1Q8WUW1 75 aa5.14□□□□□ -1.59
GPC1-206ENST00000455111 K7ERS5 55 aa5.08□□□□□ -1.6
GPC1-206ENST00000455111 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
GPC1-206ENST00000455111 PRO0628Q9UI54 55 aa5.02□□□□□ -1.61
GPC1-206ENST00000455111 KRTAP25-1Q3LHN0 102 aa4.97□□□□□ -1.61
GPC1-206ENST00000455111 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
GPC1-206ENST00000455111 PMAIP1Q13794 54 aa4.88□□□□□ -1.63
GPC1-206ENST00000455111 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
GPC1-206ENST00000455111 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
GPC1-206ENST00000455111 KRTAP4-11Q9BYQ6 195 aa4.88□□□□□ -1.63
GPC1-206ENST00000455111 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
GPC1-206ENST00000455111 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
GPC1-206ENST00000455111 MT1AP04731 61 aa4.83□□□□□ -1.64
GPC1-206ENST00000455111 ROMO1P60602 79 aa4.79□□□□□ -1.64
GPC1-206ENST00000455111 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
GPC1-206ENST00000455111 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
GPC1-206ENST00000455111 KRTAP9-6A8MVA2 160 aa4.76□□□□□ -1.65
GPC1-206ENST00000455111 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
GPC1-206ENST00000455111 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
GPC1-206ENST00000455111 KTN1-AS1Q86SY8 53 aa4.65□□□□□ -1.67
GPC1-206ENST00000455111 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
GPC1-206ENST00000455111 AHNAKQ09666 5890 aaKnown RBP4.63□□□□□ -1.67
GPC1-206ENST00000455111 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
GPC1-206ENST00000455111 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
GPC1-206ENST00000455111 PRAC1Q96KF2 57 aa4.58□□□□□ -1.68
GPC1-206ENST00000455111 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
GPC1-206ENST00000455111 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
GPC1-206ENST00000455111 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
GPC1-206ENST00000455111 MT3P25713 68 aa4.37□□□□□ -1.71
GPC1-206ENST00000455111 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
GPC1-206ENST00000455111 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
GPC1-206ENST00000455111 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
GPC1-206ENST00000455111 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
GPC1-206ENST00000455111 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
GPC1-206ENST00000455111 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
GPC1-206ENST00000455111 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
GPC1-206ENST00000455111 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
GPC1-206ENST00000455111 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
GPC1-206ENST00000455111 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
GPC1-206ENST00000455111 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
GPC1-206ENST00000455111 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
GPC1-206ENST00000455111 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
GPC1-206ENST00000455111 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
GPC1-206ENST00000455111 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
GPC1-206ENST00000455111 H3BS24 57 aa3.03□□□□□ -1.92
GPC1-206ENST00000455111 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
GPC1-206ENST00000455111 INE1O15225 51 aa2.98□□□□□ -1.93
GPC1-206ENST00000455111 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
GPC1-206ENST00000455111 PRM1P04553 51 aa2.48□□□□□ -2.01
GPC1-206ENST00000455111 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
GPC1-206ENST00000455111 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 38.3 ms