RNA–Protein interactions for RNA: ENST00000454520.6

RACGAP1-203, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 3,080 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-203ENST00000454520 SPRR2AP35326 72 aa2.48□□□□□ -2.01
RACGAP1-203ENST00000454520 TNP1P09430 55 aa2.45□□□□□ -2.02
RACGAP1-203ENST00000454520 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
RACGAP1-203ENST00000454520 NEBP20929 6669 aa2.43□□□□□ -2.02
RACGAP1-203ENST00000454520 LCE1AQ5T7P2 110 aa2.42□□□□□ -2.02
RACGAP1-203ENST00000454520 LOC100996750A0A140TA64 210 aa2.39□□□□□ -2.03
RACGAP1-203ENST00000454520 SPRR2DP22532 72 aa2.39□□□□□ -2.03
RACGAP1-203ENST00000454520 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
RACGAP1-203ENST00000454520 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
RACGAP1-203ENST00000454520 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
RACGAP1-203ENST00000454520 KRTAP4-6Q9BYQ5 205 aa2.39□□□□□ -2.03
RACGAP1-203ENST00000454520 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
RACGAP1-203ENST00000454520 PP632Q6XCG6 107 aa2.36□□□□□ -2.03
RACGAP1-203ENST00000454520 MT1EP04732 61 aa2.35□□□□□ -2.03
RACGAP1-203ENST00000454520 KRTAP2-3P0C7H8 128 aa2.34□□□□□ -2.04
RACGAP1-203ENST00000454520 KRTAP2-4Q9BYR9 128 aa2.34□□□□□ -2.04
RACGAP1-203ENST00000454520 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
RACGAP1-203ENST00000454520 LCE3BQ5TA77 95 aa2.31□□□□□ -2.04
RACGAP1-203ENST00000454520 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
RACGAP1-203ENST00000454520 LCE5AQ5TCM9 118 aa2.29□□□□□ -2.04
RACGAP1-203ENST00000454520 KRTAP2-2Q9BYT5 123 aa2.28□□□□□ -2.04
RACGAP1-203ENST00000454520 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
RACGAP1-203ENST00000454520 MT1GP13640 62 aa2.27□□□□□ -2.05
RACGAP1-203ENST00000454520 MT1LQ93083 61 aa2.27□□□□□ -2.05
RACGAP1-203ENST00000454520 LCE4AQ5TA78 99 aa2.27□□□□□ -2.05
RACGAP1-203ENST00000454520 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
RACGAP1-203ENST00000454520 KRTAP4-7Q9BYR0 210 aa2.25□□□□□ -2.05
RACGAP1-203ENST00000454520 MT1MQ8N339 61 aa2.24□□□□□ -2.05
RACGAP1-203ENST00000454520 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
RACGAP1-203ENST00000454520 KRTAP4-9Q9BYQ8 210 aa2.19□□□□□ -2.06
RACGAP1-203ENST00000454520 KRTAP9-9Q9BYP9 154 aa2.16□□□□□ -2.06
RACGAP1-203ENST00000454520 KRTAP9-4Q9BYQ2 154 aa2.16□□□□□ -2.06
RACGAP1-203ENST00000454520 MT4P47944 62 aa2.14□□□□□ -2.07
RACGAP1-203ENST00000454520 LCE3CQ5T5A8 94 aa2.11□□□□□ -2.07
RACGAP1-203ENST00000454520 LCE1DQ5T752 114 aa2.09□□□□□ -2.08
RACGAP1-203ENST00000454520 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.08
RACGAP1-203ENST00000454520 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
RACGAP1-203ENST00000454520 KRTAP19-4Q3LI73 84 aa2.03□□□□□ -2.08
RACGAP1-203ENST00000454520 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
RACGAP1-203ENST00000454520 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
RACGAP1-203ENST00000454520 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
RACGAP1-203ENST00000454520 KRTAP9-6A8MVA2 160 aa2□□□□□ -2.09
RACGAP1-203ENST00000454520 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
RACGAP1-203ENST00000454520 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
RACGAP1-203ENST00000454520 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
RACGAP1-203ENST00000454520 LCE1EQ5T753 118 aa1.97□□□□□ -2.09
RACGAP1-203ENST00000454520 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
RACGAP1-203ENST00000454520 KRTAP6-1Q3LI64 71 aa1.94□□□□□ -2.1
RACGAP1-203ENST00000454520 MT1AP04731 61 aa1.91□□□□□ -2.1
RACGAP1-203ENST00000454520 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
RACGAP1-203ENST00000454520 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
RACGAP1-203ENST00000454520 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
RACGAP1-203ENST00000454520 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
RACGAP1-203ENST00000454520 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
RACGAP1-203ENST00000454520 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
RACGAP1-203ENST00000454520 KRTAP4-11Q9BYQ6 195 aa1.82□□□□□ -2.12
RACGAP1-203ENST00000454520 LCE3EQ5T5B0 92 aa1.79□□□□□ -2.12
RACGAP1-203ENST00000454520 MT3P25713 68 aa1.77□□□□□ -2.13
RACGAP1-203ENST00000454520 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
RACGAP1-203ENST00000454520 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
RACGAP1-203ENST00000454520 LCE3DQ9BYE3 92 aa1.68□□□□□ -2.14
RACGAP1-203ENST00000454520 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
RACGAP1-203ENST00000454520 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
RACGAP1-203ENST00000454520 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
RACGAP1-203ENST00000454520 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
RACGAP1-203ENST00000454520 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
RACGAP1-203ENST00000454520 PRM1P04553 51 aa1.54□□□□□ -2.16
RACGAP1-203ENST00000454520 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
RACGAP1-203ENST00000454520 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.17
RACGAP1-203ENST00000454520 LCE1CQ5T751 118 aa1.44□□□□□ -2.18
RACGAP1-203ENST00000454520 KRTAP4-4Q9BYR3 166 aa1.37□□□□□ -2.19
RACGAP1-203ENST00000454520 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
RACGAP1-203ENST00000454520 KRTAP5-11Q6L8G4 156 aa1.29□□□□□ -2.2
RACGAP1-203ENST00000454520 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
RACGAP1-203ENST00000454520 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
RACGAP1-203ENST00000454520 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
RACGAP1-203ENST00000454520 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 120.9 ms