RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
UBE2D4-208ENST00000454350 AHNAK2Q8IVF2 5795 aa6.3□□□□□ -1.4
UBE2D4-208ENST00000454350 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
UBE2D4-208ENST00000454350 KRTAP5-10Q6L8G5 202 aa6.25□□□□□ -1.41
UBE2D4-208ENST00000454350 KRTAP12-3P60328 96 aa6.21□□□□□ -1.42
UBE2D4-208ENST00000454350 ANAPC13Q9BS18 74 aa6.21□□□□□ -1.42
UBE2D4-208ENST00000454350 CCDC179H3BU77 68 aa6.16□□□□□ -1.42
UBE2D4-208ENST00000454350 PRR15LQ9BU68 103 aa6.15□□□□□ -1.42
UBE2D4-208ENST00000454350 LINC01558Q9Y6Z2 57 aa6.15□□□□□ -1.42
UBE2D4-208ENST00000454350 KRTAP5-5Q701N2 237 aaPredicted RBP6.12□□□□□ -1.43
UBE2D4-208ENST00000454350 ATP5EP56381 51 aaPredicted RBP6.08□□□□□ -1.44
UBE2D4-208ENST00000454350 KRTAP20-2Q3LI61 65 aa6.06□□□□□ -1.44
UBE2D4-208ENST00000454350 KRTAP5-3Q6L8H2 238 aa6.05□□□□□ -1.44
UBE2D4-208ENST00000454350 KRTAP5-7Q6L8G8 165 aa6.02□□□□□ -1.45
UBE2D4-208ENST00000454350 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
UBE2D4-208ENST00000454350 UQCR11O14957 56 aa5.99□□□□□ -1.45
UBE2D4-208ENST00000454350 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
UBE2D4-208ENST00000454350 KRTAP25-1Q3LHN0 102 aa5.94□□□□□ -1.46
UBE2D4-208ENST00000454350 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
UBE2D4-208ENST00000454350 TMEM258P61165 79 aa5.86□□□□□ -1.47
UBE2D4-208ENST00000454350 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.47
UBE2D4-208ENST00000454350 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.48
UBE2D4-208ENST00000454350 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
UBE2D4-208ENST00000454350 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
UBE2D4-208ENST00000454350 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
UBE2D4-208ENST00000454350 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
UBE2D4-208ENST00000454350 K7ERS5 55 aa5.68□□□□□ -1.5
UBE2D4-208ENST00000454350 PSPHP1O15172 72 aa5.63□□□□□ -1.51
UBE2D4-208ENST00000454350 KRTAP5-2Q701N4 177 aa5.62□□□□□ -1.51
UBE2D4-208ENST00000454350 MT1AP04731 61 aa5.59□□□□□ -1.51
UBE2D4-208ENST00000454350 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
UBE2D4-208ENST00000454350 Q1T7F1 81 aa5.58□□□□□ -1.52
UBE2D4-208ENST00000454350 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
UBE2D4-208ENST00000454350 V9GYY9 64 aa5.56□□□□□ -1.52
UBE2D4-208ENST00000454350 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
UBE2D4-208ENST00000454350 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
UBE2D4-208ENST00000454350 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
UBE2D4-208ENST00000454350 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
UBE2D4-208ENST00000454350 A6NED7 52 aa5.38□□□□□ -1.55
UBE2D4-208ENST00000454350 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
UBE2D4-208ENST00000454350 ROMO1P60602 79 aa5.34□□□□□ -1.55
UBE2D4-208ENST00000454350 RPS28P62857 69 aaKnown RBP5.3□□□□□ -1.56
UBE2D4-208ENST00000454350 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
UBE2D4-208ENST00000454350 MUC5ACP98088 5654 aa5.22□□□□□ -1.57
UBE2D4-208ENST00000454350 MUC5BQ9HC84 5762 aaPredicted RBP5.19□□□□□ -1.58
UBE2D4-208ENST00000454350 AHNAKQ09666 5890 aaKnown RBP5.17□□□□□ -1.58
UBE2D4-208ENST00000454350 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
UBE2D4-208ENST00000454350 MT3P25713 68 aa5.08□□□□□ -1.6
UBE2D4-208ENST00000454350 KRTAP5-1Q6L8H4 278 aa5.07□□□□□ -1.6
UBE2D4-208ENST00000454350 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
UBE2D4-208ENST00000454350 PCP4P48539 62 aa4.72□□□□□ -1.65
UBE2D4-208ENST00000454350 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
UBE2D4-208ENST00000454350 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
UBE2D4-208ENST00000454350 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
UBE2D4-208ENST00000454350 BRK1Q8WUW1 75 aa4.34□□□□□ -1.71
UBE2D4-208ENST00000454350 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
UBE2D4-208ENST00000454350 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
UBE2D4-208ENST00000454350 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
UBE2D4-208ENST00000454350 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
UBE2D4-208ENST00000454350 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
UBE2D4-208ENST00000454350 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
UBE2D4-208ENST00000454350 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
UBE2D4-208ENST00000454350 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
UBE2D4-208ENST00000454350 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
UBE2D4-208ENST00000454350 PHGR1C9JFL3 82 aa3.6□□□□□ -1.83
UBE2D4-208ENST00000454350 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
UBE2D4-208ENST00000454350 KTN1-AS1Q86SY8 53 aa3.44□□□□□ -1.86
UBE2D4-208ENST00000454350 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
UBE2D4-208ENST00000454350 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
UBE2D4-208ENST00000454350 SVIPQ8NHG7 77 aa3.29□□□□□ -1.88
UBE2D4-208ENST00000454350 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
UBE2D4-208ENST00000454350 H3BS24 57 aa3.09□□□□□ -1.91
UBE2D4-208ENST00000454350 PRM1P04553 51 aa2.74□□□□□ -1.97
UBE2D4-208ENST00000454350 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
UBE2D4-208ENST00000454350 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
UBE2D4-208ENST00000454350 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
UBE2D4-208ENST00000454350 A0A0A0MQY5 61 aa2.01□□□□□ -2.09
UBE2D4-208ENST00000454350 INE1O15225 51 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms