RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 LCE1DQ5T752 114 aa5.75□□□□□ -1.49
NCKIPSD-208ENST00000454134 UQCR11O14957 56 aa5.73□□□□□ -1.49
NCKIPSD-208ENST00000454134 GPR98Q8WXG9 6306 aa5.72□□□□□ -1.49
NCKIPSD-208ENST00000454134 MT4P47944 62 aa5.7□□□□□ -1.5
NCKIPSD-208ENST00000454134 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
NCKIPSD-208ENST00000454134 V9GYY9 64 aa5.69□□□□□ -1.5
NCKIPSD-208ENST00000454134 Q1T7F1 81 aa5.63□□□□□ -1.51
NCKIPSD-208ENST00000454134 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
NCKIPSD-208ENST00000454134 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
NCKIPSD-208ENST00000454134 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
NCKIPSD-208ENST00000454134 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
NCKIPSD-208ENST00000454134 HMCN1Q96RW7 5635 aa5.58□□□□□ -1.52
NCKIPSD-208ENST00000454134 PCP4P48539 62 aa5.58□□□□□ -1.52
NCKIPSD-208ENST00000454134 PSPHP1O15172 72 aa5.57□□□□□ -1.52
NCKIPSD-208ENST00000454134 KRTAP4-6Q9BYQ5 205 aa5.53□□□□□ -1.52
NCKIPSD-208ENST00000454134 RPS28P62857 69 aaKnown RBP5.51□□□□□ -1.53
NCKIPSD-208ENST00000454134 K7ERS5 55 aa5.5□□□□□ -1.53
NCKIPSD-208ENST00000454134 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
NCKIPSD-208ENST00000454134 A6NED7 52 aa5.42□□□□□ -1.54
NCKIPSD-208ENST00000454134 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.54
NCKIPSD-208ENST00000454134 KRTAP5-10Q6L8G5 202 aa5.35□□□□□ -1.55
NCKIPSD-208ENST00000454134 KRTAP5-5Q701N2 237 aaPredicted RBP5.35□□□□□ -1.55
NCKIPSD-208ENST00000454134 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
NCKIPSD-208ENST00000454134 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
NCKIPSD-208ENST00000454134 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
NCKIPSD-208ENST00000454134 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
NCKIPSD-208ENST00000454134 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
NCKIPSD-208ENST00000454134 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
NCKIPSD-208ENST00000454134 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
NCKIPSD-208ENST00000454134 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
NCKIPSD-208ENST00000454134 CDC42SE1Q9NRR8 79 aa5.21□□□□□ -1.58
NCKIPSD-208ENST00000454134 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
NCKIPSD-208ENST00000454134 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
NCKIPSD-208ENST00000454134 KRTAP5-7Q6L8G8 165 aa5.14□□□□□ -1.59
NCKIPSD-208ENST00000454134 ROMO1P60602 79 aa5.13□□□□□ -1.59
NCKIPSD-208ENST00000454134 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
NCKIPSD-208ENST00000454134 MT1AP04731 61 aa4.97□□□□□ -1.61
NCKIPSD-208ENST00000454134 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
NCKIPSD-208ENST00000454134 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
NCKIPSD-208ENST00000454134 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
NCKIPSD-208ENST00000454134 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
NCKIPSD-208ENST00000454134 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.63
NCKIPSD-208ENST00000454134 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
NCKIPSD-208ENST00000454134 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
NCKIPSD-208ENST00000454134 KRTAP5-8O75690 187 aa4.69□□□□□ -1.66
NCKIPSD-208ENST00000454134 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
NCKIPSD-208ENST00000454134 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
NCKIPSD-208ENST00000454134 MT3P25713 68 aa4.53□□□□□ -1.68
NCKIPSD-208ENST00000454134 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
NCKIPSD-208ENST00000454134 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
NCKIPSD-208ENST00000454134 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
NCKIPSD-208ENST00000454134 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
NCKIPSD-208ENST00000454134 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
NCKIPSD-208ENST00000454134 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
NCKIPSD-208ENST00000454134 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
NCKIPSD-208ENST00000454134 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
NCKIPSD-208ENST00000454134 KTN1-AS1Q86SY8 53 aa4.15□□□□□ -1.75
NCKIPSD-208ENST00000454134 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
NCKIPSD-208ENST00000454134 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
NCKIPSD-208ENST00000454134 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
NCKIPSD-208ENST00000454134 H3BS24 57 aa3.79□□□□□ -1.8
NCKIPSD-208ENST00000454134 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
NCKIPSD-208ENST00000454134 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
NCKIPSD-208ENST00000454134 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
NCKIPSD-208ENST00000454134 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
NCKIPSD-208ENST00000454134 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
NCKIPSD-208ENST00000454134 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
NCKIPSD-208ENST00000454134 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
NCKIPSD-208ENST00000454134 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
NCKIPSD-208ENST00000454134 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
NCKIPSD-208ENST00000454134 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
NCKIPSD-208ENST00000454134 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
NCKIPSD-208ENST00000454134 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
NCKIPSD-208ENST00000454134 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
NCKIPSD-208ENST00000454134 INE1O15225 51 aa2.61□□□□□ -1.99
NCKIPSD-208ENST00000454134 PRM1P04553 51 aa2.61□□□□□ -1.99
NCKIPSD-208ENST00000454134 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
NCKIPSD-208ENST00000454134 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms