RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
RFTN1-207ENST00000453536 PCP4P48539 62 aa4.89□□□□□ -1.63
RFTN1-207ENST00000453536 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
RFTN1-207ENST00000453536 TNP1P09430 55 aa4.87□□□□□ -1.63
RFTN1-207ENST00000453536 AHNAK2Q8IVF2 5795 aa4.85□□□□□ -1.63
RFTN1-207ENST00000453536 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
RFTN1-207ENST00000453536 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
RFTN1-207ENST00000453536 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
RFTN1-207ENST00000453536 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
RFTN1-207ENST00000453536 PRR15LQ9BU68 103 aa4.76□□□□□ -1.65
RFTN1-207ENST00000453536 ATP5EP56381 51 aaPredicted RBP4.75□□□□□ -1.65
RFTN1-207ENST00000453536 TMEM258P61165 79 aa4.66□□□□□ -1.66
RFTN1-207ENST00000453536 UQCR11O14957 56 aa4.65□□□□□ -1.67
RFTN1-207ENST00000453536 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
RFTN1-207ENST00000453536 KRTAP5-10Q6L8G5 202 aa4.62□□□□□ -1.67
RFTN1-207ENST00000453536 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
RFTN1-207ENST00000453536 MIR22HGQ0VDD5 57 aa4.6□□□□□ -1.67
RFTN1-207ENST00000453536 PSPHP1O15172 72 aa4.56□□□□□ -1.68
RFTN1-207ENST00000453536 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
RFTN1-207ENST00000453536 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
RFTN1-207ENST00000453536 RPS28P62857 69 aaKnown RBP4.5□□□□□ -1.69
RFTN1-207ENST00000453536 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
RFTN1-207ENST00000453536 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
RFTN1-207ENST00000453536 Q1T7F1 81 aa4.41□□□□□ -1.7
RFTN1-207ENST00000453536 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
RFTN1-207ENST00000453536 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
RFTN1-207ENST00000453536 K7ERS5 55 aa4.37□□□□□ -1.71
RFTN1-207ENST00000453536 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
RFTN1-207ENST00000453536 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
RFTN1-207ENST00000453536 V9GYY9 64 aa4.33□□□□□ -1.72
RFTN1-207ENST00000453536 A6NED7 52 aa4.31□□□□□ -1.72
RFTN1-207ENST00000453536 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
RFTN1-207ENST00000453536 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
RFTN1-207ENST00000453536 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
RFTN1-207ENST00000453536 MT1AP04731 61 aa4.24□□□□□ -1.73
RFTN1-207ENST00000453536 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
RFTN1-207ENST00000453536 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
RFTN1-207ENST00000453536 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
RFTN1-207ENST00000453536 ROMO1P60602 79 aa4.19□□□□□ -1.74
RFTN1-207ENST00000453536 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
RFTN1-207ENST00000453536 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
RFTN1-207ENST00000453536 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
RFTN1-207ENST00000453536 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
RFTN1-207ENST00000453536 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
RFTN1-207ENST00000453536 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
RFTN1-207ENST00000453536 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
RFTN1-207ENST00000453536 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
RFTN1-207ENST00000453536 BRK1Q8WUW1 75 aa3.99□□□□□ -1.77
RFTN1-207ENST00000453536 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
RFTN1-207ENST00000453536 MUC5BQ9HC84 5762 aaPredicted RBP3.94□□□□□ -1.78
RFTN1-207ENST00000453536 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
RFTN1-207ENST00000453536 SVIPQ8NHG7 77 aa3.83□□□□□ -1.8
RFTN1-207ENST00000453536 MT3P25713 68 aa3.81□□□□□ -1.8
RFTN1-207ENST00000453536 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
RFTN1-207ENST00000453536 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
RFTN1-207ENST00000453536 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
RFTN1-207ENST00000453536 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
RFTN1-207ENST00000453536 H3BS24 57 aa3.61□□□□□ -1.83
RFTN1-207ENST00000453536 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
RFTN1-207ENST00000453536 PRAC1Q96KF2 57 aa3.44□□□□□ -1.86
RFTN1-207ENST00000453536 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
RFTN1-207ENST00000453536 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
RFTN1-207ENST00000453536 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
RFTN1-207ENST00000453536 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
RFTN1-207ENST00000453536 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
RFTN1-207ENST00000453536 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
RFTN1-207ENST00000453536 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
RFTN1-207ENST00000453536 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
RFTN1-207ENST00000453536 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
RFTN1-207ENST00000453536 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
RFTN1-207ENST00000453536 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
RFTN1-207ENST00000453536 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
RFTN1-207ENST00000453536 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
RFTN1-207ENST00000453536 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
RFTN1-207ENST00000453536 INE1O15225 51 aa2.48□□□□□ -2.01
RFTN1-207ENST00000453536 PRM1P04553 51 aa2.22□□□□□ -2.05
RFTN1-207ENST00000453536 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
RFTN1-207ENST00000453536 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 68.8 ms