RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
SNX17-204ENST00000453453 KRTAP19-7Q3SYF9 63 aa5.81□□□□□ -1.48
SNX17-204ENST00000453453 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
SNX17-204ENST00000453453 MT1EP04732 61 aa5.74□□□□□ -1.49
SNX17-204ENST00000453453 KRTAP5-9P26371 169 aa5.74□□□□□ -1.49
SNX17-204ENST00000453453 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.51
SNX17-204ENST00000453453 NEBP20929 6669 aa5.64□□□□□ -1.51
SNX17-204ENST00000453453 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
SNX17-204ENST00000453453 MT1LQ93083 61 aa5.6□□□□□ -1.51
SNX17-204ENST00000453453 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.51
SNX17-204ENST00000453453 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
SNX17-204ENST00000453453 SPRR2EP22531 72 aa5.54□□□□□ -1.52
SNX17-204ENST00000453453 SPRR2BP35325 72 aa5.54□□□□□ -1.52
SNX17-204ENST00000453453 SPRR2AP35326 72 aa5.54□□□□□ -1.52
SNX17-204ENST00000453453 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
SNX17-204ENST00000453453 MT1GP13640 62 aa5.52□□□□□ -1.53
SNX17-204ENST00000453453 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
SNX17-204ENST00000453453 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
SNX17-204ENST00000453453 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
SNX17-204ENST00000453453 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
SNX17-204ENST00000453453 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
SNX17-204ENST00000453453 MT1MQ8N339 61 aa5.42□□□□□ -1.54
SNX17-204ENST00000453453 MDN1Q9NU22 5596 aa5.42□□□□□ -1.54
SNX17-204ENST00000453453 SPRR2DP22532 72 aa5.35□□□□□ -1.55
SNX17-204ENST00000453453 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
SNX17-204ENST00000453453 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
SNX17-204ENST00000453453 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
SNX17-204ENST00000453453 KRTAP2-2Q9BYT5 123 aa5.22□□□□□ -1.57
SNX17-204ENST00000453453 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
SNX17-204ENST00000453453 DSTQ03001 7570 aaKnown RBP5.08□□□□□ -1.6
SNX17-204ENST00000453453 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
SNX17-204ENST00000453453 KRTAP5-5Q701N2 237 aaPredicted RBP4.88□□□□□ -1.63
SNX17-204ENST00000453453 MT1AP04731 61 aa4.78□□□□□ -1.64
SNX17-204ENST00000453453 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
SNX17-204ENST00000453453 KRTAP5-4Q6L8H1 288 aa4.75□□□□□ -1.65
SNX17-204ENST00000453453 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
SNX17-204ENST00000453453 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
SNX17-204ENST00000453453 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
SNX17-204ENST00000453453 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
SNX17-204ENST00000453453 MT4P47944 62 aa4.62□□□□□ -1.67
SNX17-204ENST00000453453 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
SNX17-204ENST00000453453 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
SNX17-204ENST00000453453 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
SNX17-204ENST00000453453 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
SNX17-204ENST00000453453 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
SNX17-204ENST00000453453 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
SNX17-204ENST00000453453 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
SNX17-204ENST00000453453 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
SNX17-204ENST00000453453 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
SNX17-204ENST00000453453 MT3P25713 68 aa4.36□□□□□ -1.71
SNX17-204ENST00000453453 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
SNX17-204ENST00000453453 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
SNX17-204ENST00000453453 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
SNX17-204ENST00000453453 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
SNX17-204ENST00000453453 PRM1P04553 51 aa4.22□□□□□ -1.73
SNX17-204ENST00000453453 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
SNX17-204ENST00000453453 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
SNX17-204ENST00000453453 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
SNX17-204ENST00000453453 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
SNX17-204ENST00000453453 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
SNX17-204ENST00000453453 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
SNX17-204ENST00000453453 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
SNX17-204ENST00000453453 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
SNX17-204ENST00000453453 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
SNX17-204ENST00000453453 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
SNX17-204ENST00000453453 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
SNX17-204ENST00000453453 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
SNX17-204ENST00000453453 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
SNX17-204ENST00000453453 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
SNX17-204ENST00000453453 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
SNX17-204ENST00000453453 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
SNX17-204ENST00000453453 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
SNX17-204ENST00000453453 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
SNX17-204ENST00000453453 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
SNX17-204ENST00000453453 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
SNX17-204ENST00000453453 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
SNX17-204ENST00000453453 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
SNX17-204ENST00000453453 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms