RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 KRTAP20-1Q3LI63 56 aa7.52□□□□□ -1.21
SNX11-203ENST00000452859 LCE1AQ5T7P2 110 aa7.49□□□□□ -1.21
SNX11-203ENST00000452859 NDUFAF8A1L188 74 aa7.42□□□□□ -1.22
SNX11-203ENST00000452859 KRTAP2-3P0C7H8 128 aa7.39□□□□□ -1.23
SNX11-203ENST00000452859 KRTAP2-4Q9BYR9 128 aa7.39□□□□□ -1.23
SNX11-203ENST00000452859 SPRR2DP22532 72 aa7.34□□□□□ -1.23
SNX11-203ENST00000452859 KRTAP19-7Q3SYF9 63 aa7.27□□□□□ -1.25
SNX11-203ENST00000452859 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
SNX11-203ENST00000452859 MT1EP04732 61 aa7.21□□□□□ -1.26
SNX11-203ENST00000452859 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
SNX11-203ENST00000452859 KRTAP2-2Q9BYT5 123 aa7.17□□□□□ -1.26
SNX11-203ENST00000452859 KRTAP2-1Q9BYU5 128 aa7.17□□□□□ -1.26
SNX11-203ENST00000452859 KRTAP19-3Q7Z4W3 81 aa7.13□□□□□ -1.27
SNX11-203ENST00000452859 LCE3AQ5TA76 89 aa7.12□□□□□ -1.27
SNX11-203ENST00000452859 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
SNX11-203ENST00000452859 LCE5AQ5TCM9 118 aa7.1□□□□□ -1.27
SNX11-203ENST00000452859 SPRR5A0A1B0GTR4 108 aa7.05□□□□□ -1.28
SNX11-203ENST00000452859 MT1GP13640 62 aa7.01□□□□□ -1.29
SNX11-203ENST00000452859 MT1LQ93083 61 aa6.93□□□□□ -1.3
SNX11-203ENST00000452859 KRTAP12-3P60328 96 aa6.89□□□□□ -1.31
SNX11-203ENST00000452859 MT1MQ8N339 61 aa6.85□□□□□ -1.31
SNX11-203ENST00000452859 DSTQ03001 7570 aaKnown RBP6.8□□□□□ -1.32
SNX11-203ENST00000452859 A0A0A0MQY5 61 aa6.79□□□□□ -1.32
SNX11-203ENST00000452859 KRTAP4-3Q9BYR4 195 aa6.65□□□□□ -1.35
SNX11-203ENST00000452859 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
SNX11-203ENST00000452859 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
SNX11-203ENST00000452859 KRTAP4-9Q9BYQ8 210 aa6.53□□□□□ -1.36
SNX11-203ENST00000452859 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
SNX11-203ENST00000452859 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
SNX11-203ENST00000452859 LCE1DQ5T752 114 aa6.41□□□□□ -1.38
SNX11-203ENST00000452859 KRTAP5-4Q6L8H1 288 aa6.39□□□□□ -1.39
SNX11-203ENST00000452859 MT4P47944 62 aa6.39□□□□□ -1.39
SNX11-203ENST00000452859 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
SNX11-203ENST00000452859 HMCN1Q96RW7 5635 aa6.22□□□□□ -1.41
SNX11-203ENST00000452859 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.41
SNX11-203ENST00000452859 INE1O15225 51 aa6.21□□□□□ -1.41
SNX11-203ENST00000452859 KRTAP4-6Q9BYQ5 205 aa6.2□□□□□ -1.42
SNX11-203ENST00000452859 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
SNX11-203ENST00000452859 GPR98Q8WXG9 6306 aa6.04□□□□□ -1.44
SNX11-203ENST00000452859 KRTAP20-2Q3LI61 65 aa6.03□□□□□ -1.44
SNX11-203ENST00000452859 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
SNX11-203ENST00000452859 MT1AP04731 61 aa5.92□□□□□ -1.46
SNX11-203ENST00000452859 SYNE1Q8NF91 8797 aaKnown RBP5.91□□□□□ -1.46
SNX11-203ENST00000452859 AHNAK2Q8IVF2 5795 aa5.88□□□□□ -1.47
SNX11-203ENST00000452859 KRTAP6-1Q3LI64 71 aa5.85□□□□□ -1.47
SNX11-203ENST00000452859 KRTAP5-10Q6L8G5 202 aa5.83□□□□□ -1.48
SNX11-203ENST00000452859 KRTAP5-3Q6L8H2 238 aa5.82□□□□□ -1.48
SNX11-203ENST00000452859 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
SNX11-203ENST00000452859 KRTAP5-2Q701N4 177 aa5.63□□□□□ -1.51
SNX11-203ENST00000452859 KRTAP5-7Q6L8G8 165 aa5.59□□□□□ -1.52
SNX11-203ENST00000452859 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
SNX11-203ENST00000452859 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
SNX11-203ENST00000452859 MT3P25713 68 aa5.44□□□□□ -1.54
SNX11-203ENST00000452859 KRTAP5-8O75690 187 aa5.25□□□□□ -1.57
SNX11-203ENST00000452859 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
SNX11-203ENST00000452859 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
SNX11-203ENST00000452859 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
SNX11-203ENST00000452859 LCE3DQ9BYE3 92 aa4.94□□□□□ -1.62
SNX11-203ENST00000452859 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
SNX11-203ENST00000452859 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
SNX11-203ENST00000452859 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
SNX11-203ENST00000452859 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
SNX11-203ENST00000452859 AHNAKQ09666 5890 aaKnown RBP4.76□□□□□ -1.65
SNX11-203ENST00000452859 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
SNX11-203ENST00000452859 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
SNX11-203ENST00000452859 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
SNX11-203ENST00000452859 PRM1P04553 51 aa4.5□□□□□ -1.69
SNX11-203ENST00000452859 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
SNX11-203ENST00000452859 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
SNX11-203ENST00000452859 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
SNX11-203ENST00000452859 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
SNX11-203ENST00000452859 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.8
SNX11-203ENST00000452859 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
SNX11-203ENST00000452859 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
SNX11-203ENST00000452859 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
SNX11-203ENST00000452859 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
SNX11-203ENST00000452859 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 71.9 ms