RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 MT4P47944 62 aa3.9□□□□□ -1.79
USP1-204ENST00000452143 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
USP1-204ENST00000452143 MT1MQ8N339 61 aa3.89□□□□□ -1.79
USP1-204ENST00000452143 SEC61GP60059 68 aa3.88□□□□□ -1.79
USP1-204ENST00000452143 SERP1Q9Y6X1 66 aa3.87□□□□□ -1.79
USP1-204ENST00000452143 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
USP1-204ENST00000452143 MT1LQ93083 61 aa3.86□□□□□ -1.79
USP1-204ENST00000452143 SPATA8Q6RVD6 105 aa3.84□□□□□ -1.79
USP1-204ENST00000452143 COA5Q86WW8 74 aa3.84□□□□□ -1.79
USP1-204ENST00000452143 K7ERU9 68 aa3.83□□□□□ -1.8
USP1-204ENST00000452143 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
USP1-204ENST00000452143 A0A1B0GU33 70 aa3.82□□□□□ -1.8
USP1-204ENST00000452143 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
USP1-204ENST00000452143 SERP2Q8N6R1 65 aa3.81□□□□□ -1.8
USP1-204ENST00000452143 MT3P25713 68 aa3.78□□□□□ -1.8
USP1-204ENST00000452143 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
USP1-204ENST00000452143 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
USP1-204ENST00000452143 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
USP1-204ENST00000452143 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
USP1-204ENST00000452143 SMIM26A0A096LP01 95 aa3.73□□□□□ -1.81
USP1-204ENST00000452143 TNP1P09430 55 aa3.72□□□□□ -1.81
USP1-204ENST00000452143 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
USP1-204ENST00000452143 A0A1B0GU69 56 aa3.66□□□□□ -1.82
USP1-204ENST00000452143 A8MU10 97 aa3.65□□□□□ -1.83
USP1-204ENST00000452143 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
USP1-204ENST00000452143 H7BZZ5 65 aa3.63□□□□□ -1.83
USP1-204ENST00000452143 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
USP1-204ENST00000452143 COX7CP15954 63 aa3.62□□□□□ -1.83
USP1-204ENST00000452143 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
USP1-204ENST00000452143 SPRR5A0A1B0GTR4 108 aa3.61□□□□□ -1.83
USP1-204ENST00000452143 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
USP1-204ENST00000452143 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
USP1-204ENST00000452143 PRAC1Q96KF2 57 aa3.56□□□□□ -1.84
USP1-204ENST00000452143 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
USP1-204ENST00000452143 PRR15LQ9BU68 103 aa3.51□□□□□ -1.85
USP1-204ENST00000452143 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
USP1-204ENST00000452143 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
USP1-204ENST00000452143 ATP5EP56381 51 aaPredicted RBP3.4□□□□□ -1.87
USP1-204ENST00000452143 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
USP1-204ENST00000452143 LINC01558Q9Y6Z2 57 aa3.4□□□□□ -1.87
USP1-204ENST00000452143 UQCR11O14957 56 aa3.39□□□□□ -1.87
USP1-204ENST00000452143 ANAPC13Q9BS18 74 aa3.37□□□□□ -1.87
USP1-204ENST00000452143 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
USP1-204ENST00000452143 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
USP1-204ENST00000452143 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
USP1-204ENST00000452143 CCDC179H3BU77 68 aa3.29□□□□□ -1.88
USP1-204ENST00000452143 MT1AP04731 61 aa3.29□□□□□ -1.88
USP1-204ENST00000452143 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
USP1-204ENST00000452143 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
USP1-204ENST00000452143 K7ERS5 55 aa3.28□□□□□ -1.88
USP1-204ENST00000452143 MIR22HGQ0VDD5 57 aa3.27□□□□□ -1.89
USP1-204ENST00000452143 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
USP1-204ENST00000452143 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
USP1-204ENST00000452143 TMEM258P61165 79 aa3.21□□□□□ -1.9
USP1-204ENST00000452143 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
USP1-204ENST00000452143 V9GYY9 64 aa3.09□□□□□ -1.91
USP1-204ENST00000452143 RPS28P62857 69 aaKnown RBP3.08□□□□□ -1.92
USP1-204ENST00000452143 PSPHP1O15172 72 aa3.07□□□□□ -1.92
USP1-204ENST00000452143 CDC42SE1Q9NRR8 79 aa3.07□□□□□ -1.92
USP1-204ENST00000452143 Q1T7F1 81 aa3.04□□□□□ -1.92
USP1-204ENST00000452143 ROMO1P60602 79 aa2.99□□□□□ -1.93
USP1-204ENST00000452143 A6NED7 52 aa2.98□□□□□ -1.93
USP1-204ENST00000452143 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
USP1-204ENST00000452143 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
USP1-204ENST00000452143 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
USP1-204ENST00000452143 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
USP1-204ENST00000452143 BRK1Q8WUW1 75 aa2.67□□□□□ -1.98
USP1-204ENST00000452143 PMAIP1Q13794 54 aa2.58□□□□□ -2
USP1-204ENST00000452143 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
USP1-204ENST00000452143 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
USP1-204ENST00000452143 LUZP6Q538Z0 58 aa2.37□□□□□ -2.03
USP1-204ENST00000452143 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
USP1-204ENST00000452143 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
USP1-204ENST00000452143 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
USP1-204ENST00000452143 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
USP1-204ENST00000452143 INE1O15225 51 aa1.69□□□□□ -2.14
USP1-204ENST00000452143 PRM1P04553 51 aa1.5□□□□□ -2.17
USP1-204ENST00000452143 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 8.9 ms