RNA–Protein interactions for RNA: ENST00000451980.3

LINC01548-201, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 5 BASIC

Gene LINC01548, Length 696 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-201ENST00000451980 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
LINC01548-201ENST00000451980 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
LINC01548-201ENST00000451980 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
LINC01548-201ENST00000451980 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
LINC01548-201ENST00000451980 SPINT4Q6UDR6 99 aa3.49□□□□□ -1.85
LINC01548-201ENST00000451980 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
LINC01548-201ENST00000451980 MT1XP80297 61 aa3.48□□□□□ -1.85
LINC01548-201ENST00000451980 PLAC4Q8WY50 150 aa3.45□□□□□ -1.86
LINC01548-201ENST00000451980 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
LINC01548-201ENST00000451980 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
LINC01548-201ENST00000451980 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
LINC01548-201ENST00000451980 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
LINC01548-201ENST00000451980 K7ERS5 55 aa3.35□□□□□ -1.87
LINC01548-201ENST00000451980 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
LINC01548-201ENST00000451980 ROMO1P60602 79 aa3.3□□□□□ -1.88
LINC01548-201ENST00000451980 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
LINC01548-201ENST00000451980 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
LINC01548-201ENST00000451980 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
LINC01548-201ENST00000451980 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
LINC01548-201ENST00000451980 KMT2DO14686 5537 aa3.24□□□□□ -1.89
LINC01548-201ENST00000451980 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
LINC01548-201ENST00000451980 TNP1P09430 55 aa3.22□□□□□ -1.89
LINC01548-201ENST00000451980 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
LINC01548-201ENST00000451980 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
LINC01548-201ENST00000451980 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
LINC01548-201ENST00000451980 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
LINC01548-201ENST00000451980 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
LINC01548-201ENST00000451980 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
LINC01548-201ENST00000451980 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
LINC01548-201ENST00000451980 KRTAP8-1Q8IUC2 63 aa3.13□□□□□ -1.91
LINC01548-201ENST00000451980 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
LINC01548-201ENST00000451980 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
LINC01548-201ENST00000451980 MT1EP04732 61 aa3.05□□□□□ -1.92
LINC01548-201ENST00000451980 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
LINC01548-201ENST00000451980 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
LINC01548-201ENST00000451980 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
LINC01548-201ENST00000451980 KRTAP6-3Q3LI67 103 aa3.02□□□□□ -1.93
LINC01548-201ENST00000451980 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
LINC01548-201ENST00000451980 MT1LQ93083 61 aa2.97□□□□□ -1.93
LINC01548-201ENST00000451980 NEBP20929 6669 aa2.94□□□□□ -1.94
LINC01548-201ENST00000451980 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
LINC01548-201ENST00000451980 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
LINC01548-201ENST00000451980 MT1MQ8N339 61 aa2.88□□□□□ -1.95
LINC01548-201ENST00000451980 MT1GP13640 62 aa2.87□□□□□ -1.95
LINC01548-201ENST00000451980 SPRR2EP22531 72 aa2.87□□□□□ -1.95
LINC01548-201ENST00000451980 SPRR2BP35325 72 aa2.87□□□□□ -1.95
LINC01548-201ENST00000451980 SPRR2AP35326 72 aa2.87□□□□□ -1.95
LINC01548-201ENST00000451980 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
LINC01548-201ENST00000451980 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.96
LINC01548-201ENST00000451980 SPRR2DP22532 72 aa2.76□□□□□ -1.97
LINC01548-201ENST00000451980 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
LINC01548-201ENST00000451980 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
LINC01548-201ENST00000451980 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
LINC01548-201ENST00000451980 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
LINC01548-201ENST00000451980 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
LINC01548-201ENST00000451980 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
LINC01548-201ENST00000451980 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
LINC01548-201ENST00000451980 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
LINC01548-201ENST00000451980 MT1AP04731 61 aa2.52□□□□□ -2.01
LINC01548-201ENST00000451980 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
LINC01548-201ENST00000451980 MT4P47944 62 aa2.41□□□□□ -2.02
LINC01548-201ENST00000451980 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
LINC01548-201ENST00000451980 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
LINC01548-201ENST00000451980 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
LINC01548-201ENST00000451980 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
LINC01548-201ENST00000451980 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
LINC01548-201ENST00000451980 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
LINC01548-201ENST00000451980 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
LINC01548-201ENST00000451980 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
LINC01548-201ENST00000451980 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
LINC01548-201ENST00000451980 INE1O15225 51 aa1.95□□□□□ -2.1
LINC01548-201ENST00000451980 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
LINC01548-201ENST00000451980 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
LINC01548-201ENST00000451980 PRM1P04553 51 aa1.74□□□□□ -2.13
LINC01548-201ENST00000451980 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
LINC01548-201ENST00000451980 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
LINC01548-201ENST00000451980 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 78.6 ms