RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 SPRR2DP22532 72 aa8.67□□□□□ -1.02
CPSF4-207ENST00000451876 KRTAP12-3P60328 96 aa8.67□□□□□ -1.02
CPSF4-207ENST00000451876 KRTAP23-1A1A580 65 aa8.65□□□□□ -1.03
CPSF4-207ENST00000451876 LCE5AQ5TCM9 118 aa8.65□□□□□ -1.03
CPSF4-207ENST00000451876 MT1LQ93083 61 aa8.6□□□□□ -1.03
CPSF4-207ENST00000451876 KRTAP20-1Q3LI63 56 aa8.58□□□□□ -1.04
CPSF4-207ENST00000451876 KTN1-AS1Q86SY8 53 aa8.56□□□□□ -1.04
CPSF4-207ENST00000451876 MT1GP13640 62 aa8.53□□□□□ -1.04
CPSF4-207ENST00000451876 KRTAP2-3P0C7H8 128 aa8.49□□□□□ -1.05
CPSF4-207ENST00000451876 KRTAP2-4Q9BYR9 128 aa8.49□□□□□ -1.05
CPSF4-207ENST00000451876 PP632Q6XCG6 107 aa8.47□□□□□ -1.05
CPSF4-207ENST00000451876 MT1MQ8N339 61 aa8.43□□□□□ -1.06
CPSF4-207ENST00000451876 LCE3BQ5TA77 95 aa8.39□□□□□ -1.07
CPSF4-207ENST00000451876 DSTQ03001 7570 aaKnown RBP8.33□□□□□ -1.08
CPSF4-207ENST00000451876 KRTAP15-1Q3LI76 137 aa8.29□□□□□ -1.08
CPSF4-207ENST00000451876 KRTAP4-7Q9BYR0 210 aa8.28□□□□□ -1.08
CPSF4-207ENST00000451876 KRTAP4-3Q9BYR4 195 aa8.26□□□□□ -1.09
CPSF4-207ENST00000451876 KRTAP2-2Q9BYT5 123 aa8.26□□□□□ -1.09
CPSF4-207ENST00000451876 KRTAP2-1Q9BYU5 128 aa8.26□□□□□ -1.09
CPSF4-207ENST00000451876 PRAC1Q96KF2 57 aa8.13□□□□□ -1.11
CPSF4-207ENST00000451876 KRTAP19-4Q3LI73 84 aa8.1□□□□□ -1.11
CPSF4-207ENST00000451876 LCE3CQ5T5A8 94 aa8.03□□□□□ -1.12
CPSF4-207ENST00000451876 LOC100996750A0A140TA64 210 aa7.81□□□□□ -1.16
CPSF4-207ENST00000451876 KRTAP5-5Q701N2 237 aaPredicted RBP7.69□□□□□ -1.18
CPSF4-207ENST00000451876 KRTAP4-9Q9BYQ8 210 aa7.69□□□□□ -1.18
CPSF4-207ENST00000451876 KRTAP5-4Q6L8H1 288 aa7.68□□□□□ -1.18
CPSF4-207ENST00000451876 LCE4AQ5TA78 99 aa7.66□□□□□ -1.18
CPSF4-207ENST00000451876 KRTAP9-6A8MVA2 160 aa7.64□□□□□ -1.19
CPSF4-207ENST00000451876 LCE1DQ5T752 114 aa7.57□□□□□ -1.2
CPSF4-207ENST00000451876 MT4P47944 62 aa7.56□□□□□ -1.2
CPSF4-207ENST00000451876 KRTAP4-6Q9BYQ5 205 aa7.43□□□□□ -1.22
CPSF4-207ENST00000451876 HMCN1Q96RW7 5635 aa7.43□□□□□ -1.22
CPSF4-207ENST00000451876 SYNE1Q8NF91 8797 aaKnown RBP7.32□□□□□ -1.24
CPSF4-207ENST00000451876 MT1AP04731 61 aa7.31□□□□□ -1.24
CPSF4-207ENST00000451876 KRTAP6-1Q3LI64 71 aa7.27□□□□□ -1.25
CPSF4-207ENST00000451876 KRTAP12-4P60329 112 aa7.27□□□□□ -1.25
CPSF4-207ENST00000451876 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
CPSF4-207ENST00000451876 KRTAP20-2Q3LI61 65 aa7.22□□□□□ -1.25
CPSF4-207ENST00000451876 KRTAP9-4Q9BYQ2 154 aa7□□□□□ -1.29
CPSF4-207ENST00000451876 KRTAP5-3Q6L8H2 238 aa6.98□□□□□ -1.29
CPSF4-207ENST00000451876 H3BS24 57 aa6.94□□□□□ -1.3
CPSF4-207ENST00000451876 AHNAK2Q8IVF2 5795 aa6.87□□□□□ -1.31
CPSF4-207ENST00000451876 KRTAP5-2Q701N4 177 aa6.84□□□□□ -1.31
CPSF4-207ENST00000451876 KRTAP6-2Q3LI66 62 aa6.82□□□□□ -1.32
CPSF4-207ENST00000451876 GPR98Q8WXG9 6306 aa6.8□□□□□ -1.32
CPSF4-207ENST00000451876 NDUFAF8A1L188 74 aa6.76□□□□□ -1.33
CPSF4-207ENST00000451876 KRTAP5-10Q6L8G5 202 aa6.72□□□□□ -1.33
CPSF4-207ENST00000451876 MT3P25713 68 aa6.63□□□□□ -1.35
CPSF4-207ENST00000451876 LUZP6Q538Z0 58 aa6.54□□□□□ -1.36
CPSF4-207ENST00000451876 OBSCNQ5VST9 7968 aa6.45□□□□□ -1.38
CPSF4-207ENST00000451876 KRTAP4-11Q9BYQ6 195 aa6.43□□□□□ -1.38
CPSF4-207ENST00000451876 KRTAP5-7Q6L8G8 165 aa6.33□□□□□ -1.4
CPSF4-207ENST00000451876 KRTAP5-8O75690 187 aa6.22□□□□□ -1.41
CPSF4-207ENST00000451876 A0A0A0MQY5 61 aa6.05□□□□□ -1.44
CPSF4-207ENST00000451876 KRTAP5-1Q6L8H4 278 aa6.03□□□□□ -1.44
CPSF4-207ENST00000451876 LCE1EQ5T753 118 aa5.94□□□□□ -1.46
CPSF4-207ENST00000451876 LCE3DQ9BYE3 92 aa5.91□□□□□ -1.46
CPSF4-207ENST00000451876 MUC5ACP98088 5654 aa5.81□□□□□ -1.48
CPSF4-207ENST00000451876 KRTAP9-9Q9BYP9 154 aa5.74□□□□□ -1.49
CPSF4-207ENST00000451876 LCE3EQ5T5B0 92 aa5.64□□□□□ -1.51
CPSF4-207ENST00000451876 KRTAP4-2Q9BYR5 136 aa5.61□□□□□ -1.51
CPSF4-207ENST00000451876 INE1O15225 51 aa5.59□□□□□ -1.51
CPSF4-207ENST00000451876 LCE1BQ5T7P3 118 aa5.59□□□□□ -1.52
CPSF4-207ENST00000451876 MUC5BQ9HC84 5762 aaPredicted RBP5.57□□□□□ -1.52
CPSF4-207ENST00000451876 LCE1CQ5T751 118 aa5.53□□□□□ -1.52
CPSF4-207ENST00000451876 AHNAKQ09666 5890 aaKnown RBP5.39□□□□□ -1.55
CPSF4-207ENST00000451876 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.12□□□□□ -1.59
CPSF4-207ENST00000451876 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
CPSF4-207ENST00000451876 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
CPSF4-207ENST00000451876 KRTAP21-2Q3LI59 83 aa4.78□□□□□ -1.64
CPSF4-207ENST00000451876 LCE1FQ5T754 118 aa4.64□□□□□ -1.67
CPSF4-207ENST00000451876 PRM1P04553 51 aa4.61□□□□□ -1.67
CPSF4-207ENST00000451876 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
CPSF4-207ENST00000451876 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
CPSF4-207ENST00000451876 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.78
CPSF4-207ENST00000451876 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
CPSF4-207ENST00000451876 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms