RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
LINC01004-202ENST00000450686 A0A0D9SG42 100 aa3.66□□□□□ -1.82
LINC01004-202ENST00000450686 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
LINC01004-202ENST00000450686 SNURFQ9Y675 71 aa3.65□□□□□ -1.83
LINC01004-202ENST00000450686 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
LINC01004-202ENST00000450686 MT1MQ8N339 61 aa3.64□□□□□ -1.83
LINC01004-202ENST00000450686 MT1GP13640 62 aa3.63□□□□□ -1.83
LINC01004-202ENST00000450686 MT1LQ93083 61 aa3.6□□□□□ -1.83
LINC01004-202ENST00000450686 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
LINC01004-202ENST00000450686 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.83
LINC01004-202ENST00000450686 SPINT4Q6UDR6 99 aa3.58□□□□□ -1.84
LINC01004-202ENST00000450686 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
LINC01004-202ENST00000450686 J3QR89 54 aa3.57□□□□□ -1.84
LINC01004-202ENST00000450686 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
LINC01004-202ENST00000450686 SMIM20Q8N5G0 67 aa3.52□□□□□ -1.85
LINC01004-202ENST00000450686 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
LINC01004-202ENST00000450686 COA5Q86WW8 74 aa3.51□□□□□ -1.85
LINC01004-202ENST00000450686 SPANXA2-OT1Q8N9U9 137 aa3.51□□□□□ -1.85
LINC01004-202ENST00000450686 C10orf95Q9H7T3 257 aa3.51□□□□□ -1.85
LINC01004-202ENST00000450686 A0A1B0GU33 70 aa3.46□□□□□ -1.86
LINC01004-202ENST00000450686 SERP1Q9Y6X1 66 aa3.46□□□□□ -1.86
LINC01004-202ENST00000450686 A8MU10 97 aa3.44□□□□□ -1.86
LINC01004-202ENST00000450686 SEC61GP60059 68 aa3.44□□□□□ -1.86
LINC01004-202ENST00000450686 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
LINC01004-202ENST00000450686 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
LINC01004-202ENST00000450686 SERP2Q8N6R1 65 aa3.4□□□□□ -1.87
LINC01004-202ENST00000450686 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
LINC01004-202ENST00000450686 TNP1P09430 55 aa3.36□□□□□ -1.87
LINC01004-202ENST00000450686 K7ERU9 68 aa3.35□□□□□ -1.87
LINC01004-202ENST00000450686 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
LINC01004-202ENST00000450686 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
LINC01004-202ENST00000450686 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
LINC01004-202ENST00000450686 SMIM26A0A096LP01 95 aa3.32□□□□□ -1.88
LINC01004-202ENST00000450686 A0A1B0GU69 56 aa3.3□□□□□ -1.88
LINC01004-202ENST00000450686 H7BZZ5 65 aa3.26□□□□□ -1.89
LINC01004-202ENST00000450686 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
LINC01004-202ENST00000450686 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
LINC01004-202ENST00000450686 COX7CP15954 63 aa3.23□□□□□ -1.89
LINC01004-202ENST00000450686 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
LINC01004-202ENST00000450686 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
LINC01004-202ENST00000450686 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
LINC01004-202ENST00000450686 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
LINC01004-202ENST00000450686 PRR15LQ9BU68 103 aa3.08□□□□□ -1.92
LINC01004-202ENST00000450686 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
LINC01004-202ENST00000450686 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
LINC01004-202ENST00000450686 LINC01558Q9Y6Z2 57 aa3.04□□□□□ -1.92
LINC01004-202ENST00000450686 CCDC179H3BU77 68 aa3.03□□□□□ -1.92
LINC01004-202ENST00000450686 MT1AP04731 61 aa3.03□□□□□ -1.92
LINC01004-202ENST00000450686 ANAPC13Q9BS18 74 aa3.01□□□□□ -1.93
LINC01004-202ENST00000450686 UQCR11O14957 56 aa2.99□□□□□ -1.93
LINC01004-202ENST00000450686 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
LINC01004-202ENST00000450686 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
LINC01004-202ENST00000450686 ATP5EP56381 51 aaPredicted RBP2.91□□□□□ -1.94
LINC01004-202ENST00000450686 K7ERS5 55 aa2.85□□□□□ -1.95
LINC01004-202ENST00000450686 PSPHP1O15172 72 aa2.82□□□□□ -1.96
LINC01004-202ENST00000450686 TMEM258P61165 79 aa2.79□□□□□ -1.96
LINC01004-202ENST00000450686 RPS28P62857 69 aaKnown RBP2.72□□□□□ -1.97
LINC01004-202ENST00000450686 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
LINC01004-202ENST00000450686 CDC42SE1Q9NRR8 79 aa2.72□□□□□ -1.97
LINC01004-202ENST00000450686 Q1T7F1 81 aa2.71□□□□□ -1.98
LINC01004-202ENST00000450686 ROMO1P60602 79 aa2.68□□□□□ -1.98
LINC01004-202ENST00000450686 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
LINC01004-202ENST00000450686 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
LINC01004-202ENST00000450686 A6NED7 52 aa2.66□□□□□ -1.98
LINC01004-202ENST00000450686 V9GYY9 64 aa2.63□□□□□ -1.99
LINC01004-202ENST00000450686 PRO0628Q9UI54 55 aa2.2□□□□□ -2.06
LINC01004-202ENST00000450686 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
LINC01004-202ENST00000450686 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
LINC01004-202ENST00000450686 BRK1Q8WUW1 75 aa2.09□□□□□ -2.07
LINC01004-202ENST00000450686 PMAIP1Q13794 54 aa2.08□□□□□ -2.08
LINC01004-202ENST00000450686 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
LINC01004-202ENST00000450686 KTN1-AS1Q86SY8 53 aa1.99□□□□□ -2.09
LINC01004-202ENST00000450686 LUZP6Q538Z0 58 aa1.63□□□□□ -2.15
LINC01004-202ENST00000450686 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
LINC01004-202ENST00000450686 PRM1P04553 51 aa1.41□□□□□ -2.18
LINC01004-202ENST00000450686 INE1O15225 51 aa1.31□□□□□ -2.2
LINC01004-202ENST00000450686 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms