RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
CPSF7-207ENST00000449811 SERP1Q9Y6X1 66 aa4.34□□□□□ -1.71
CPSF7-207ENST00000449811 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
CPSF7-207ENST00000449811 A0A1B0GU33 70 aa4.31□□□□□ -1.72
CPSF7-207ENST00000449811 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
CPSF7-207ENST00000449811 SPANXA2-OT1Q8N9U9 137 aa4.27□□□□□ -1.73
CPSF7-207ENST00000449811 SNURFQ9Y675 71 aa4.26□□□□□ -1.73
CPSF7-207ENST00000449811 SMIM20Q8N5G0 67 aa4.25□□□□□ -1.73
CPSF7-207ENST00000449811 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
CPSF7-207ENST00000449811 PCP4L1A6NKN8 68 aa4.23□□□□□ -1.73
CPSF7-207ENST00000449811 COA5Q86WW8 74 aa4.2□□□□□ -1.74
CPSF7-207ENST00000449811 SMIM26A0A096LP01 95 aa4.19□□□□□ -1.74
CPSF7-207ENST00000449811 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
CPSF7-207ENST00000449811 A8MU10 97 aa4.17□□□□□ -1.74
CPSF7-207ENST00000449811 J3QR89 54 aa4.14□□□□□ -1.75
CPSF7-207ENST00000449811 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
CPSF7-207ENST00000449811 MT1AP04731 61 aa4.08□□□□□ -1.76
CPSF7-207ENST00000449811 A0A1B0GV90 55 aa4.04□□□□□ -1.76
CPSF7-207ENST00000449811 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
CPSF7-207ENST00000449811 SERP2Q8N6R1 65 aa4.02□□□□□ -1.77
CPSF7-207ENST00000449811 A0A1B0GU69 56 aa4.01□□□□□ -1.77
CPSF7-207ENST00000449811 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
CPSF7-207ENST00000449811 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
CPSF7-207ENST00000449811 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
CPSF7-207ENST00000449811 K7ERU9 68 aa3.94□□□□□ -1.78
CPSF7-207ENST00000449811 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
CPSF7-207ENST00000449811 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
CPSF7-207ENST00000449811 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
CPSF7-207ENST00000449811 PCP4P48539 62 aa3.87□□□□□ -1.79
CPSF7-207ENST00000449811 MT3P25713 68 aa3.76□□□□□ -1.81
CPSF7-207ENST00000449811 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
CPSF7-207ENST00000449811 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
CPSF7-207ENST00000449811 H7BZZ5 65 aa3.73□□□□□ -1.81
CPSF7-207ENST00000449811 KRTAP23-1A1A580 65 aa3.68□□□□□ -1.82
CPSF7-207ENST00000449811 COX7CP15954 63 aa3.65□□□□□ -1.83
CPSF7-207ENST00000449811 UQCR11O14957 56 aa3.59□□□□□ -1.83
CPSF7-207ENST00000449811 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
CPSF7-207ENST00000449811 ANAPC13Q9BS18 74 aa3.59□□□□□ -1.83
CPSF7-207ENST00000449811 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
CPSF7-207ENST00000449811 LINC01558Q9Y6Z2 57 aa3.56□□□□□ -1.84
CPSF7-207ENST00000449811 H3BS24 57 aa3.55□□□□□ -1.84
CPSF7-207ENST00000449811 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
CPSF7-207ENST00000449811 RPS28P62857 69 aaKnown RBP3.51□□□□□ -1.85
CPSF7-207ENST00000449811 K7ERS5 55 aa3.5□□□□□ -1.85
CPSF7-207ENST00000449811 MIR22HGQ0VDD5 57 aa3.46□□□□□ -1.86
CPSF7-207ENST00000449811 TMEM258P61165 79 aa3.45□□□□□ -1.86
CPSF7-207ENST00000449811 CCDC179H3BU77 68 aa3.44□□□□□ -1.86
CPSF7-207ENST00000449811 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
CPSF7-207ENST00000449811 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
CPSF7-207ENST00000449811 ATP5EP56381 51 aaPredicted RBP3.4□□□□□ -1.87
CPSF7-207ENST00000449811 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
CPSF7-207ENST00000449811 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
CPSF7-207ENST00000449811 V9GYY9 64 aa3.23□□□□□ -1.89
CPSF7-207ENST00000449811 PRO0628Q9UI54 55 aa3.21□□□□□ -1.9
CPSF7-207ENST00000449811 Q1T7F1 81 aa3.18□□□□□ -1.9
CPSF7-207ENST00000449811 ROMO1P60602 79 aa3.15□□□□□ -1.91
CPSF7-207ENST00000449811 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
CPSF7-207ENST00000449811 PSPHP1O15172 72 aa3.1□□□□□ -1.91
CPSF7-207ENST00000449811 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
CPSF7-207ENST00000449811 BRK1Q8WUW1 75 aa3.06□□□□□ -1.92
CPSF7-207ENST00000449811 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
CPSF7-207ENST00000449811 PMAIP1Q13794 54 aa3□□□□□ -1.93
CPSF7-207ENST00000449811 A6NED7 52 aa2.96□□□□□ -1.94
CPSF7-207ENST00000449811 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
CPSF7-207ENST00000449811 KTN1-AS1Q86SY8 53 aa2.92□□□□□ -1.94
CPSF7-207ENST00000449811 A0A0A0MQY5 61 aa2.87□□□□□ -1.95
CPSF7-207ENST00000449811 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
CPSF7-207ENST00000449811 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
CPSF7-207ENST00000449811 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
CPSF7-207ENST00000449811 PRAC1Q96KF2 57 aa2.59□□□□□ -1.99
CPSF7-207ENST00000449811 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
CPSF7-207ENST00000449811 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
CPSF7-207ENST00000449811 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CPSF7-207ENST00000449811 LUZP6Q538Z0 58 aa2.26□□□□□ -2.05
CPSF7-207ENST00000449811 NDUFAF8A1L188 74 aa2.25□□□□□ -2.05
CPSF7-207ENST00000449811 INE1O15225 51 aa2.04□□□□□ -2.08
CPSF7-207ENST00000449811 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
CPSF7-207ENST00000449811 PRM1P04553 51 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms