RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
CCDC171-203ENST00000449575 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
CCDC171-203ENST00000449575 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
CCDC171-203ENST00000449575 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
CCDC171-203ENST00000449575 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
CCDC171-203ENST00000449575 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
CCDC171-203ENST00000449575 KRTAP8-1Q8IUC2 63 aa3.83□□□□□ -1.8
CCDC171-203ENST00000449575 SPRR2FQ96RM1 72 aa3.79□□□□□ -1.8
CCDC171-203ENST00000449575 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
CCDC171-203ENST00000449575 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
CCDC171-203ENST00000449575 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
CCDC171-203ENST00000449575 NEBP20929 6669 aa3.74□□□□□ -1.81
CCDC171-203ENST00000449575 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
CCDC171-203ENST00000449575 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
CCDC171-203ENST00000449575 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
CCDC171-203ENST00000449575 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
CCDC171-203ENST00000449575 SPRR2EP22531 72 aa3.67□□□□□ -1.82
CCDC171-203ENST00000449575 SPRR2BP35325 72 aa3.67□□□□□ -1.82
CCDC171-203ENST00000449575 SPRR2AP35326 72 aa3.67□□□□□ -1.82
CCDC171-203ENST00000449575 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
CCDC171-203ENST00000449575 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
CCDC171-203ENST00000449575 MT1EP04732 61 aa3.62□□□□□ -1.83
CCDC171-203ENST00000449575 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
CCDC171-203ENST00000449575 SPRR2DP22532 72 aa3.54□□□□□ -1.84
CCDC171-203ENST00000449575 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
CCDC171-203ENST00000449575 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
CCDC171-203ENST00000449575 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
CCDC171-203ENST00000449575 MT1LQ93083 61 aa3.51□□□□□ -1.85
CCDC171-203ENST00000449575 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
CCDC171-203ENST00000449575 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
CCDC171-203ENST00000449575 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
CCDC171-203ENST00000449575 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
CCDC171-203ENST00000449575 MT1GP13640 62 aa3.45□□□□□ -1.86
CCDC171-203ENST00000449575 MT1MQ8N339 61 aa3.44□□□□□ -1.86
CCDC171-203ENST00000449575 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
CCDC171-203ENST00000449575 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
CCDC171-203ENST00000449575 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
CCDC171-203ENST00000449575 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
CCDC171-203ENST00000449575 LCE4AQ5TA78 99 aa3.32□□□□□ -1.88
CCDC171-203ENST00000449575 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
CCDC171-203ENST00000449575 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
CCDC171-203ENST00000449575 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
CCDC171-203ENST00000449575 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
CCDC171-203ENST00000449575 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
CCDC171-203ENST00000449575 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
CCDC171-203ENST00000449575 MT4P47944 62 aa3.11□□□□□ -1.91
CCDC171-203ENST00000449575 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
CCDC171-203ENST00000449575 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
CCDC171-203ENST00000449575 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
CCDC171-203ENST00000449575 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
CCDC171-203ENST00000449575 MT1AP04731 61 aa2.96□□□□□ -1.94
CCDC171-203ENST00000449575 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
CCDC171-203ENST00000449575 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
CCDC171-203ENST00000449575 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
CCDC171-203ENST00000449575 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
CCDC171-203ENST00000449575 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
CCDC171-203ENST00000449575 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
CCDC171-203ENST00000449575 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.97
CCDC171-203ENST00000449575 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
CCDC171-203ENST00000449575 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
CCDC171-203ENST00000449575 MT3P25713 68 aa2.68□□□□□ -1.98
CCDC171-203ENST00000449575 PRM1P04553 51 aa2.67□□□□□ -1.98
CCDC171-203ENST00000449575 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
CCDC171-203ENST00000449575 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
CCDC171-203ENST00000449575 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CCDC171-203ENST00000449575 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
CCDC171-203ENST00000449575 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
CCDC171-203ENST00000449575 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
CCDC171-203ENST00000449575 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
CCDC171-203ENST00000449575 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
CCDC171-203ENST00000449575 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
CCDC171-203ENST00000449575 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
CCDC171-203ENST00000449575 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
CCDC171-203ENST00000449575 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
CCDC171-203ENST00000449575 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
CCDC171-203ENST00000449575 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
CCDC171-203ENST00000449575 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
CCDC171-203ENST00000449575 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 75.9 ms