RNA–Protein interactions for RNA: ENST00000449405.1

LINC01939-202, Transcript of long intergenic non-protein coding RNA 1939, humanhuman

TSL 3

Gene LINC01939, Length 368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01939-202ENST00000449405 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
LINC01939-202ENST00000449405 H7BZZ5 65 aa5.13□□□□□ -1.59
LINC01939-202ENST00000449405 A0A1B0GU33 70 aa5.11□□□□□ -1.59
LINC01939-202ENST00000449405 ANAPC13Q9BS18 74 aa5.11□□□□□ -1.59
LINC01939-202ENST00000449405 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
LINC01939-202ENST00000449405 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
LINC01939-202ENST00000449405 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
LINC01939-202ENST00000449405 TNP1P09430 55 aa5.03□□□□□ -1.6
LINC01939-202ENST00000449405 A0A1B0GU69 56 aa5□□□□□ -1.61
LINC01939-202ENST00000449405 KRTAP12-4P60329 112 aa5□□□□□ -1.61
LINC01939-202ENST00000449405 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
LINC01939-202ENST00000449405 CCDC179H3BU77 68 aa4.96□□□□□ -1.62
LINC01939-202ENST00000449405 A8MU10 97 aa4.95□□□□□ -1.62
LINC01939-202ENST00000449405 SMIM26A0A096LP01 95 aa4.94□□□□□ -1.62
LINC01939-202ENST00000449405 ATP5EP56381 51 aaPredicted RBP4.94□□□□□ -1.62
LINC01939-202ENST00000449405 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.63
LINC01939-202ENST00000449405 PRR15LQ9BU68 103 aa4.9□□□□□ -1.63
LINC01939-202ENST00000449405 TMEM258P61165 79 aa4.82□□□□□ -1.64
LINC01939-202ENST00000449405 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
LINC01939-202ENST00000449405 LINC01558Q9Y6Z2 57 aa4.79□□□□□ -1.64
LINC01939-202ENST00000449405 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
LINC01939-202ENST00000449405 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
LINC01939-202ENST00000449405 UQCR11O14957 56 aa4.7□□□□□ -1.66
LINC01939-202ENST00000449405 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
LINC01939-202ENST00000449405 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
LINC01939-202ENST00000449405 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
LINC01939-202ENST00000449405 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
LINC01939-202ENST00000449405 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
LINC01939-202ENST00000449405 MIR22HGQ0VDD5 57 aa4.59□□□□□ -1.67
LINC01939-202ENST00000449405 V9GYY9 64 aa4.59□□□□□ -1.67
LINC01939-202ENST00000449405 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.68
LINC01939-202ENST00000449405 MT1AP04731 61 aa4.58□□□□□ -1.68
LINC01939-202ENST00000449405 K7ERS5 55 aa4.56□□□□□ -1.68
LINC01939-202ENST00000449405 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
LINC01939-202ENST00000449405 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
LINC01939-202ENST00000449405 PSPHP1O15172 72 aa4.53□□□□□ -1.68
LINC01939-202ENST00000449405 Q1T7F1 81 aa4.51□□□□□ -1.69
LINC01939-202ENST00000449405 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
LINC01939-202ENST00000449405 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
LINC01939-202ENST00000449405 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
LINC01939-202ENST00000449405 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
LINC01939-202ENST00000449405 A6NED7 52 aa4.41□□□□□ -1.7
LINC01939-202ENST00000449405 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
LINC01939-202ENST00000449405 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
LINC01939-202ENST00000449405 RPS28P62857 69 aaKnown RBP4.31□□□□□ -1.72
LINC01939-202ENST00000449405 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
LINC01939-202ENST00000449405 PCP4P48539 62 aa4.3□□□□□ -1.72
LINC01939-202ENST00000449405 CDC42SE1Q9NRR8 79 aa4.28□□□□□ -1.72
LINC01939-202ENST00000449405 MT3P25713 68 aa4.21□□□□□ -1.74
LINC01939-202ENST00000449405 ROMO1P60602 79 aa4.2□□□□□ -1.74
LINC01939-202ENST00000449405 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
LINC01939-202ENST00000449405 BRK1Q8WUW1 75 aa3.83□□□□□ -1.8
LINC01939-202ENST00000449405 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
LINC01939-202ENST00000449405 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
LINC01939-202ENST00000449405 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
LINC01939-202ENST00000449405 PMAIP1Q13794 54 aa3.61□□□□□ -1.83
LINC01939-202ENST00000449405 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
LINC01939-202ENST00000449405 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
LINC01939-202ENST00000449405 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
LINC01939-202ENST00000449405 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
LINC01939-202ENST00000449405 PRO0628Q9UI54 55 aa3.34□□□□□ -1.87
LINC01939-202ENST00000449405 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
LINC01939-202ENST00000449405 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
LINC01939-202ENST00000449405 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
LINC01939-202ENST00000449405 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
LINC01939-202ENST00000449405 SVIPQ8NHG7 77 aa3.12□□□□□ -1.91
LINC01939-202ENST00000449405 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
LINC01939-202ENST00000449405 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
LINC01939-202ENST00000449405 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
LINC01939-202ENST00000449405 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
LINC01939-202ENST00000449405 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
LINC01939-202ENST00000449405 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
LINC01939-202ENST00000449405 NDUFAF8A1L188 74 aa2.36□□□□□ -2.03
LINC01939-202ENST00000449405 PRM1P04553 51 aa2.14□□□□□ -2.07
LINC01939-202ENST00000449405 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
LINC01939-202ENST00000449405 A0A0A0MQY5 61 aa1.91□□□□□ -2.1
LINC01939-202ENST00000449405 INE1O15225 51 aa1.91□□□□□ -2.1
LINC01939-202ENST00000449405 H3BS24 57 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 63.4 ms