RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
RFC4-209ENST00000448497 TNP1P09430 55 aa2.87□□□□□ -1.95
RFC4-209ENST00000448497 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
RFC4-209ENST00000448497 MT1XP80297 61 aa2.85□□□□□ -1.95
RFC4-209ENST00000448497 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
RFC4-209ENST00000448497 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
RFC4-209ENST00000448497 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
RFC4-209ENST00000448497 USH2AO75445 5202 aa2.74□□□□□ -1.97
RFC4-209ENST00000448497 KRTAP19-6Q3LI70 58 aa2.72□□□□□ -1.97
RFC4-209ENST00000448497 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
RFC4-209ENST00000448497 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
RFC4-209ENST00000448497 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
RFC4-209ENST00000448497 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
RFC4-209ENST00000448497 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
RFC4-209ENST00000448497 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
RFC4-209ENST00000448497 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
RFC4-209ENST00000448497 KRTAP19-5Q3LI72 72 aa2.57□□□□□ -2
RFC4-209ENST00000448497 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
RFC4-209ENST00000448497 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
RFC4-209ENST00000448497 MT1EP04732 61 aa2.49□□□□□ -2.01
RFC4-209ENST00000448497 KMT2DO14686 5537 aa2.48□□□□□ -2.01
RFC4-209ENST00000448497 CRCT1Q9UGL9 99 aa2.48□□□□□ -2.01
RFC4-209ENST00000448497 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
RFC4-209ENST00000448497 MT1LQ93083 61 aa2.45□□□□□ -2.02
RFC4-209ENST00000448497 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
RFC4-209ENST00000448497 FSIP2Q5CZC0 6907 aa2.44□□□□□ -2.02
RFC4-209ENST00000448497 MT1GP13640 62 aa2.39□□□□□ -2.03
RFC4-209ENST00000448497 KRTAP5-9P26371 169 aa2.39□□□□□ -2.03
RFC4-209ENST00000448497 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
RFC4-209ENST00000448497 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
RFC4-209ENST00000448497 MT1MQ8N339 61 aa2.34□□□□□ -2.03
RFC4-209ENST00000448497 KRTAP5-4Q6L8H1 288 aa2.32□□□□□ -2.04
RFC4-209ENST00000448497 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
RFC4-209ENST00000448497 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
RFC4-209ENST00000448497 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
RFC4-209ENST00000448497 MACF1Q9UPN3 7388 aaKnown RBP2.29□□□□□ -2.04
RFC4-209ENST00000448497 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
RFC4-209ENST00000448497 SPRR2EP22531 72 aa2.22□□□□□ -2.05
RFC4-209ENST00000448497 SPRR2BP35325 72 aa2.22□□□□□ -2.05
RFC4-209ENST00000448497 SPRR2AP35326 72 aa2.22□□□□□ -2.05
RFC4-209ENST00000448497 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
RFC4-209ENST00000448497 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
RFC4-209ENST00000448497 KRTAP2-1Q9BYU5 128 aa2.21□□□□□ -2.06
RFC4-209ENST00000448497 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
RFC4-209ENST00000448497 SYNE2Q8WXH0 6885 aaKnown RBP2.17□□□□□ -2.06
RFC4-209ENST00000448497 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
RFC4-209ENST00000448497 SPRR2DP22532 72 aa2.14□□□□□ -2.07
RFC4-209ENST00000448497 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
RFC4-209ENST00000448497 MT1AP04731 61 aa2.1□□□□□ -2.07
RFC4-209ENST00000448497 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
RFC4-209ENST00000448497 INE1O15225 51 aa2.07□□□□□ -2.08
RFC4-209ENST00000448497 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
RFC4-209ENST00000448497 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
RFC4-209ENST00000448497 NEBP20929 6669 aa2.03□□□□□ -2.08
RFC4-209ENST00000448497 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
RFC4-209ENST00000448497 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
RFC4-209ENST00000448497 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
RFC4-209ENST00000448497 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
RFC4-209ENST00000448497 KRTAP20-1Q3LI63 56 aa1.9□□□□□ -2.11
RFC4-209ENST00000448497 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
RFC4-209ENST00000448497 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
RFC4-209ENST00000448497 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
RFC4-209ENST00000448497 MT4P47944 62 aa1.82□□□□□ -2.12
RFC4-209ENST00000448497 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
RFC4-209ENST00000448497 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
RFC4-209ENST00000448497 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
RFC4-209ENST00000448497 PRM1P04553 51 aa1.58□□□□□ -2.16
RFC4-209ENST00000448497 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
RFC4-209ENST00000448497 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
RFC4-209ENST00000448497 KRTAP5-8O75690 187 aa1.55□□□□□ -2.16
RFC4-209ENST00000448497 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
RFC4-209ENST00000448497 GPR98Q8WXG9 6306 aa1.46□□□□□ -2.18
RFC4-209ENST00000448497 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
RFC4-209ENST00000448497 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
RFC4-209ENST00000448497 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
RFC4-209ENST00000448497 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
RFC4-209ENST00000448497 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
RFC4-209ENST00000448497 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 118.9 ms