RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 KRTAP4-6Q9BYQ5 205 aa9.74□□□□□ -0.85
CBX4-202ENST00000448310 KRTAP5-10Q6L8G5 202 aa9.65□□□□□ -0.86
CBX4-202ENST00000448310 KRTAP4-7Q9BYR0 210 aa9.59□□□□□ -0.87
CBX4-202ENST00000448310 KRTAP12-3P60328 96 aa9.47□□□□□ -0.89
CBX4-202ENST00000448310 KRTAP5-3Q6L8H2 238 aa9.35□□□□□ -0.91
CBX4-202ENST00000448310 PRR15LQ9BU68 103 aa9.33□□□□□ -0.92
CBX4-202ENST00000448310 KRTAP20-2Q3LI61 65 aa9.31□□□□□ -0.92
CBX4-202ENST00000448310 KRTAP5-7Q6L8G8 165 aa9.3□□□□□ -0.92
CBX4-202ENST00000448310 KRTAP5-5Q701N2 237 aaPredicted RBP9.27□□□□□ -0.93
CBX4-202ENST00000448310 ANAPC13Q9BS18 74 aa9.26□□□□□ -0.93
CBX4-202ENST00000448310 LINC01558Q9Y6Z2 57 aa9.18□□□□□ -0.94
CBX4-202ENST00000448310 SPRR5A0A1B0GTR4 108 aa9.17□□□□□ -0.94
CBX4-202ENST00000448310 CCDC179H3BU77 68 aa9.15□□□□□ -0.94
CBX4-202ENST00000448310 SYNE1Q8NF91 8797 aaKnown RBP9.12□□□□□ -0.95
CBX4-202ENST00000448310 LOC100996750A0A140TA64 210 aa9.11□□□□□ -0.95
CBX4-202ENST00000448310 KRTAP12-4P60329 112 aa9.1□□□□□ -0.95
CBX4-202ENST00000448310 ATP5EP56381 51 aaPredicted RBP9.08□□□□□ -0.96
CBX4-202ENST00000448310 UQCR11O14957 56 aa9.02□□□□□ -0.97
CBX4-202ENST00000448310 KRTAP25-1Q3LHN0 102 aa8.98□□□□□ -0.97
CBX4-202ENST00000448310 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
CBX4-202ENST00000448310 KRTAP19-4Q3LI73 84 aa8.77□□□□□ -1.01
CBX4-202ENST00000448310 TMEM258P61165 79 aa8.7□□□□□ -1.02
CBX4-202ENST00000448310 KRTAP15-1Q3LI76 137 aa8.7□□□□□ -1.02
CBX4-202ENST00000448310 K7ERS5 55 aa8.67□□□□□ -1.02
CBX4-202ENST00000448310 LCE3CQ5T5A8 94 aa8.67□□□□□ -1.02
CBX4-202ENST00000448310 KRTAP4-11Q9BYQ6 195 aa8.58□□□□□ -1.04
CBX4-202ENST00000448310 KRTAP23-1A1A580 65 aa8.57□□□□□ -1.04
CBX4-202ENST00000448310 KRTAP5-2Q701N4 177 aa8.54□□□□□ -1.04
CBX4-202ENST00000448310 KRTAP6-1Q3LI64 71 aa8.53□□□□□ -1.04
CBX4-202ENST00000448310 MT1AP04731 61 aa8.52□□□□□ -1.05
CBX4-202ENST00000448310 PSPHP1O15172 72 aa8.45□□□□□ -1.06
CBX4-202ENST00000448310 KRTAP5-8O75690 187 aa8.31□□□□□ -1.08
CBX4-202ENST00000448310 V9GYY9 64 aa8.3□□□□□ -1.08
CBX4-202ENST00000448310 KRTAP9-4Q9BYQ2 154 aa8.27□□□□□ -1.09
CBX4-202ENST00000448310 KRTAP9-6A8MVA2 160 aa8.25□□□□□ -1.09
CBX4-202ENST00000448310 AHNAKQ09666 5890 aaKnown RBP8.24□□□□□ -1.09
CBX4-202ENST00000448310 Q1T7F1 81 aa8.24□□□□□ -1.09
CBX4-202ENST00000448310 KRTAP6-2Q3LI66 62 aa8.22□□□□□ -1.09
CBX4-202ENST00000448310 OBSCNQ5VST9 7968 aa8.19□□□□□ -1.1
CBX4-202ENST00000448310 CDC42SE1Q9NRR8 79 aa8.18□□□□□ -1.1
CBX4-202ENST00000448310 MUC5ACP98088 5654 aa8.17□□□□□ -1.1
CBX4-202ENST00000448310 MUC5BQ9HC84 5762 aaPredicted RBP8.17□□□□□ -1.1
CBX4-202ENST00000448310 A6NED7 52 aa8.11□□□□□ -1.11
CBX4-202ENST00000448310 RPS28P62857 69 aaKnown RBP8.09□□□□□ -1.11
CBX4-202ENST00000448310 ROMO1P60602 79 aa8.04□□□□□ -1.12
CBX4-202ENST00000448310 KRTAP9-9Q9BYP9 154 aa7.93□□□□□ -1.14
CBX4-202ENST00000448310 MT3P25713 68 aa7.79□□□□□ -1.16
CBX4-202ENST00000448310 KRTAP5-1Q6L8H4 278 aa7.73□□□□□ -1.17
CBX4-202ENST00000448310 LCE1EQ5T753 118 aa7.22□□□□□ -1.25
CBX4-202ENST00000448310 PCP4P48539 62 aa6.94□□□□□ -1.3
CBX4-202ENST00000448310 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
CBX4-202ENST00000448310 LCE1BQ5T7P3 118 aa6.91□□□□□ -1.3
CBX4-202ENST00000448310 LCE1CQ5T751 118 aa6.71□□□□□ -1.34
CBX4-202ENST00000448310 BRK1Q8WUW1 75 aa6.45□□□□□ -1.38
CBX4-202ENST00000448310 KRTAP4-12Q9BQ66 201 aa6.45□□□□□ -1.38
CBX4-202ENST00000448310 LCE3DQ9BYE3 92 aa6.16□□□□□ -1.42
CBX4-202ENST00000448310 KRTAP5-11Q6L8G4 156 aa6.12□□□□□ -1.43
CBX4-202ENST00000448310 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.05□□□□□ -1.44
CBX4-202ENST00000448310 PMAIP1Q13794 54 aa6.01□□□□□ -1.45
CBX4-202ENST00000448310 PRAC1Q96KF2 57 aa6.01□□□□□ -1.45
CBX4-202ENST00000448310 LCE1FQ5T754 118 aa6□□□□□ -1.45
CBX4-202ENST00000448310 LCE3EQ5T5B0 92 aa5.73□□□□□ -1.49
CBX4-202ENST00000448310 PHGR1C9JFL3 82 aa5.65□□□□□ -1.5
CBX4-202ENST00000448310 KRTAP21-2Q3LI59 83 aa5.61□□□□□ -1.51
CBX4-202ENST00000448310 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
CBX4-202ENST00000448310 KRTAP4-4Q9BYR3 166 aa5.26□□□□□ -1.57
CBX4-202ENST00000448310 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
CBX4-202ENST00000448310 MUC19Q7Z5P9 8384 aa5.09□□□□□ -1.59
CBX4-202ENST00000448310 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
CBX4-202ENST00000448310 SVIPQ8NHG7 77 aa4.95□□□□□ -1.62
CBX4-202ENST00000448310 H3BS24 57 aa4.81□□□□□ -1.64
CBX4-202ENST00000448310 KRTAP21-1Q3LI58 79 aa4.26□□□□□ -1.73
CBX4-202ENST00000448310 PRM1P04553 51 aa4.12□□□□□ -1.75
CBX4-202ENST00000448310 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
CBX4-202ENST00000448310 MUC16Q8WXI7 14507 aa3.6□□□□□ -1.83
CBX4-202ENST00000448310 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
CBX4-202ENST00000448310 INE1O15225 51 aa3.32□□□□□ -1.88
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms