RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 MT1LQ93083 61 aa8.91□□□□□ -0.98
UFD1-204ENST00000447868 PP632Q6XCG6 107 aa8.89□□□□□ -0.99
UFD1-204ENST00000447868 DSTQ03001 7570 aaKnown RBP8.87□□□□□ -0.99
UFD1-204ENST00000447868 MT1MQ8N339 61 aa8.83□□□□□ -1
UFD1-204ENST00000447868 PCP4P48539 62 aa8.82□□□□□ -1
UFD1-204ENST00000447868 A6NED7 52 aa8.78□□□□□ -1
UFD1-204ENST00000447868 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
UFD1-204ENST00000447868 KRTAP12-3P60328 96 aa8.75□□□□□ -1.01
UFD1-204ENST00000447868 RPS28P62857 69 aaKnown RBP8.71□□□□□ -1.02
UFD1-204ENST00000447868 KRTAP4-3Q9BYR4 195 aa8.66□□□□□ -1.02
UFD1-204ENST00000447868 KRTAP4-9Q9BYQ8 210 aa8.57□□□□□ -1.04
UFD1-204ENST00000447868 KRTAP4-7Q9BYR0 210 aa8.52□□□□□ -1.05
UFD1-204ENST00000447868 CDC42SE1Q9NRR8 79 aa8.47□□□□□ -1.05
UFD1-204ENST00000447868 KRTAP23-1A1A580 65 aa8.41□□□□□ -1.06
UFD1-204ENST00000447868 LCE4AQ5TA78 99 aa8.39□□□□□ -1.07
UFD1-204ENST00000447868 LCE1DQ5T752 114 aa8.37□□□□□ -1.07
UFD1-204ENST00000447868 ROMO1P60602 79 aa8.35□□□□□ -1.07
UFD1-204ENST00000447868 MT4P47944 62 aa8.33□□□□□ -1.08
UFD1-204ENST00000447868 KRTAP5-4Q6L8H1 288 aa8.27□□□□□ -1.09
UFD1-204ENST00000447868 KRTAP15-1Q3LI76 137 aa8.23□□□□□ -1.09
UFD1-204ENST00000447868 KRTAP19-4Q3LI73 84 aa8.18□□□□□ -1.1
UFD1-204ENST00000447868 HMCN1Q96RW7 5635 aa8.17□□□□□ -1.1
UFD1-204ENST00000447868 KRTAP4-6Q9BYQ5 205 aa8.1□□□□□ -1.11
UFD1-204ENST00000447868 LCE3CQ5T5A8 94 aa8.08□□□□□ -1.12
UFD1-204ENST00000447868 LOC100996750A0A140TA64 210 aa8.07□□□□□ -1.12
UFD1-204ENST00000447868 GPR98Q8WXG9 6306 aa8.07□□□□□ -1.12
UFD1-204ENST00000447868 KRTAP5-5Q701N2 237 aaPredicted RBP8.05□□□□□ -1.12
UFD1-204ENST00000447868 AHNAK2Q8IVF2 5795 aa7.82□□□□□ -1.16
UFD1-204ENST00000447868 KRTAP12-4P60329 112 aa7.81□□□□□ -1.16
UFD1-204ENST00000447868 KRTAP20-2Q3LI61 65 aa7.81□□□□□ -1.16
UFD1-204ENST00000447868 SPRR5A0A1B0GTR4 108 aa7.77□□□□□ -1.17
UFD1-204ENST00000447868 BRK1Q8WUW1 75 aa7.75□□□□□ -1.17
UFD1-204ENST00000447868 SYNE1Q8NF91 8797 aaKnown RBP7.66□□□□□ -1.18
UFD1-204ENST00000447868 KRTAP5-10Q6L8G5 202 aa7.64□□□□□ -1.19
UFD1-204ENST00000447868 KRTAP9-6A8MVA2 160 aa7.62□□□□□ -1.19
UFD1-204ENST00000447868 MT1AP04731 61 aa7.58□□□□□ -1.2
UFD1-204ENST00000447868 KRTAP5-3Q6L8H2 238 aa7.56□□□□□ -1.2
UFD1-204ENST00000447868 KRTAP6-1Q3LI64 71 aa7.54□□□□□ -1.2
UFD1-204ENST00000447868 KRTAP5-7Q6L8G8 165 aa7.31□□□□□ -1.24
UFD1-204ENST00000447868 KRTAP9-4Q9BYQ2 154 aa7.31□□□□□ -1.24
UFD1-204ENST00000447868 KRTAP5-2Q701N4 177 aa7.28□□□□□ -1.24
UFD1-204ENST00000447868 PMAIP1Q13794 54 aa7.27□□□□□ -1.25
UFD1-204ENST00000447868 KRTAP6-2Q3LI66 62 aa7.17□□□□□ -1.26
UFD1-204ENST00000447868 KRTAP4-11Q9BYQ6 195 aa7.08□□□□□ -1.28
UFD1-204ENST00000447868 PRAC1Q96KF2 57 aa7.01□□□□□ -1.29
UFD1-204ENST00000447868 MT3P25713 68 aa6.92□□□□□ -1.3
UFD1-204ENST00000447868 KRTAP5-8O75690 187 aa6.83□□□□□ -1.32
UFD1-204ENST00000447868 PRO0628Q9UI54 55 aa6.82□□□□□ -1.32
UFD1-204ENST00000447868 OBSCNQ5VST9 7968 aa6.71□□□□□ -1.33
UFD1-204ENST00000447868 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
UFD1-204ENST00000447868 KRTAP5-1Q6L8H4 278 aa6.49□□□□□ -1.37
UFD1-204ENST00000447868 KRTAP9-9Q9BYP9 154 aa6.46□□□□□ -1.38
UFD1-204ENST00000447868 MUC5BQ9HC84 5762 aaPredicted RBP6.37□□□□□ -1.39
UFD1-204ENST00000447868 MUC5ACP98088 5654 aa6.34□□□□□ -1.39
UFD1-204ENST00000447868 AHNAKQ09666 5890 aaKnown RBP6.33□□□□□ -1.4
UFD1-204ENST00000447868 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
UFD1-204ENST00000447868 LCE1EQ5T753 118 aa6.27□□□□□ -1.41
UFD1-204ENST00000447868 LCE1BQ5T7P3 118 aa5.97□□□□□ -1.45
UFD1-204ENST00000447868 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
UFD1-204ENST00000447868 LUZP6Q538Z0 58 aa5.86□□□□□ -1.47
UFD1-204ENST00000447868 LCE3DQ9BYE3 92 aa5.86□□□□□ -1.47
UFD1-204ENST00000447868 LCE1CQ5T751 118 aa5.83□□□□□ -1.48
UFD1-204ENST00000447868 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
UFD1-204ENST00000447868 KRTAP4-12Q9BQ66 201 aa5.36□□□□□ -1.55
UFD1-204ENST00000447868 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.31□□□□□ -1.56
UFD1-204ENST00000447868 KRTAP5-11Q6L8G4 156 aa5.26□□□□□ -1.57
UFD1-204ENST00000447868 LCE1FQ5T754 118 aa5.06□□□□□ -1.6
UFD1-204ENST00000447868 KRTAP21-2Q3LI59 83 aa4.95□□□□□ -1.62
UFD1-204ENST00000447868 NDUFAF8A1L188 74 aa4.85□□□□□ -1.63
UFD1-204ENST00000447868 KRTAP4-4Q9BYR3 166 aa4.56□□□□□ -1.68
UFD1-204ENST00000447868 PHGR1C9JFL3 82 aa4.55□□□□□ -1.68
UFD1-204ENST00000447868 PRM1P04553 51 aa4.3□□□□□ -1.72
UFD1-204ENST00000447868 MUC19Q7Z5P9 8384 aa4.11□□□□□ -1.75
UFD1-204ENST00000447868 H3BS24 57 aa4.11□□□□□ -1.75
UFD1-204ENST00000447868 INE1O15225 51 aa3.86□□□□□ -1.79
UFD1-204ENST00000447868 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
UFD1-204ENST00000447868 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
UFD1-204ENST00000447868 MUC16Q8WXI7 14507 aa2.98□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms