RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
HLA-DOB-207ENST00000447394 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
HLA-DOB-207ENST00000447394 MT1EP04732 61 aa4.92□□□□□ -1.62
HLA-DOB-207ENST00000447394 SPRR2DP22532 72 aa4.83□□□□□ -1.64
HLA-DOB-207ENST00000447394 KRTAP20-1Q3LI63 56 aa4.8□□□□□ -1.64
HLA-DOB-207ENST00000447394 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
HLA-DOB-207ENST00000447394 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
HLA-DOB-207ENST00000447394 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
HLA-DOB-207ENST00000447394 MT1LQ93083 61 aa4.75□□□□□ -1.65
HLA-DOB-207ENST00000447394 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
HLA-DOB-207ENST00000447394 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
HLA-DOB-207ENST00000447394 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
HLA-DOB-207ENST00000447394 MT1GP13640 62 aa4.67□□□□□ -1.66
HLA-DOB-207ENST00000447394 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
HLA-DOB-207ENST00000447394 MT1MQ8N339 61 aa4.66□□□□□ -1.66
HLA-DOB-207ENST00000447394 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
HLA-DOB-207ENST00000447394 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
HLA-DOB-207ENST00000447394 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
HLA-DOB-207ENST00000447394 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
HLA-DOB-207ENST00000447394 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
HLA-DOB-207ENST00000447394 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
HLA-DOB-207ENST00000447394 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.67
HLA-DOB-207ENST00000447394 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
HLA-DOB-207ENST00000447394 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
HLA-DOB-207ENST00000447394 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.71
HLA-DOB-207ENST00000447394 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
HLA-DOB-207ENST00000447394 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
HLA-DOB-207ENST00000447394 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
HLA-DOB-207ENST00000447394 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
HLA-DOB-207ENST00000447394 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
HLA-DOB-207ENST00000447394 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
HLA-DOB-207ENST00000447394 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
HLA-DOB-207ENST00000447394 MT4P47944 62 aa4.23□□□□□ -1.73
HLA-DOB-207ENST00000447394 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
HLA-DOB-207ENST00000447394 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
HLA-DOB-207ENST00000447394 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
HLA-DOB-207ENST00000447394 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
HLA-DOB-207ENST00000447394 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
HLA-DOB-207ENST00000447394 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
HLA-DOB-207ENST00000447394 MT1AP04731 61 aa4.03□□□□□ -1.76
HLA-DOB-207ENST00000447394 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
HLA-DOB-207ENST00000447394 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
HLA-DOB-207ENST00000447394 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
HLA-DOB-207ENST00000447394 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
HLA-DOB-207ENST00000447394 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
HLA-DOB-207ENST00000447394 INE1O15225 51 aa3.93□□□□□ -1.78
HLA-DOB-207ENST00000447394 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
HLA-DOB-207ENST00000447394 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
HLA-DOB-207ENST00000447394 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
HLA-DOB-207ENST00000447394 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
HLA-DOB-207ENST00000447394 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
HLA-DOB-207ENST00000447394 MT3P25713 68 aa3.64□□□□□ -1.83
HLA-DOB-207ENST00000447394 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
HLA-DOB-207ENST00000447394 KRTAP5-7Q6L8G8 165 aa3.54□□□□□ -1.84
HLA-DOB-207ENST00000447394 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
HLA-DOB-207ENST00000447394 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
HLA-DOB-207ENST00000447394 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
HLA-DOB-207ENST00000447394 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
HLA-DOB-207ENST00000447394 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
HLA-DOB-207ENST00000447394 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
HLA-DOB-207ENST00000447394 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
HLA-DOB-207ENST00000447394 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
HLA-DOB-207ENST00000447394 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
HLA-DOB-207ENST00000447394 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
HLA-DOB-207ENST00000447394 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
HLA-DOB-207ENST00000447394 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
HLA-DOB-207ENST00000447394 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
HLA-DOB-207ENST00000447394 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
HLA-DOB-207ENST00000447394 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
HLA-DOB-207ENST00000447394 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
HLA-DOB-207ENST00000447394 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
HLA-DOB-207ENST00000447394 PRM1P04553 51 aa2.57□□□□□ -2
HLA-DOB-207ENST00000447394 LCE1FQ5T754 118 aa2.53□□□□□ -2
HLA-DOB-207ENST00000447394 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
HLA-DOB-207ENST00000447394 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
HLA-DOB-207ENST00000447394 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
HLA-DOB-207ENST00000447394 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
HLA-DOB-207ENST00000447394 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 66 ms