RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 SPRR5A0A1B0GTR4 108 aa4.64□□□□□ -1.67
SSR4-205ENST00000447375 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
SSR4-205ENST00000447375 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
SSR4-205ENST00000447375 PSPHP1O15172 72 aa4.61□□□□□ -1.67
SSR4-205ENST00000447375 PCP4P48539 62 aa4.61□□□□□ -1.67
SSR4-205ENST00000447375 TNP1P09430 55 aa4.6□□□□□ -1.67
SSR4-205ENST00000447375 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
SSR4-205ENST00000447375 MT1EP04732 61 aa4.59□□□□□ -1.67
SSR4-205ENST00000447375 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
SSR4-205ENST00000447375 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
SSR4-205ENST00000447375 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
SSR4-205ENST00000447375 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
SSR4-205ENST00000447375 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
SSR4-205ENST00000447375 K7ERS5 55 aa4.5□□□□□ -1.69
SSR4-205ENST00000447375 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
SSR4-205ENST00000447375 A6NED7 52 aa4.46□□□□□ -1.7
SSR4-205ENST00000447375 MT1GP13640 62 aa4.44□□□□□ -1.7
SSR4-205ENST00000447375 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
SSR4-205ENST00000447375 MT1LQ93083 61 aa4.41□□□□□ -1.7
SSR4-205ENST00000447375 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
SSR4-205ENST00000447375 KRTAP12-3P60328 96 aa4.36□□□□□ -1.71
SSR4-205ENST00000447375 MT1MQ8N339 61 aa4.35□□□□□ -1.71
SSR4-205ENST00000447375 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
SSR4-205ENST00000447375 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
SSR4-205ENST00000447375 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
SSR4-205ENST00000447375 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
SSR4-205ENST00000447375 ROMO1P60602 79 aa4.24□□□□□ -1.73
SSR4-205ENST00000447375 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
SSR4-205ENST00000447375 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
SSR4-205ENST00000447375 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
SSR4-205ENST00000447375 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
SSR4-205ENST00000447375 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
SSR4-205ENST00000447375 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
SSR4-205ENST00000447375 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
SSR4-205ENST00000447375 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
SSR4-205ENST00000447375 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
SSR4-205ENST00000447375 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
SSR4-205ENST00000447375 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
SSR4-205ENST00000447375 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
SSR4-205ENST00000447375 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
SSR4-205ENST00000447375 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
SSR4-205ENST00000447375 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
SSR4-205ENST00000447375 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
SSR4-205ENST00000447375 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
SSR4-205ENST00000447375 PMAIP1Q13794 54 aa3.77□□□□□ -1.81
SSR4-205ENST00000447375 MT1AP04731 61 aa3.75□□□□□ -1.81
SSR4-205ENST00000447375 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
SSR4-205ENST00000447375 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
SSR4-205ENST00000447375 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
SSR4-205ENST00000447375 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
SSR4-205ENST00000447375 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
SSR4-205ENST00000447375 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
SSR4-205ENST00000447375 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
SSR4-205ENST00000447375 MT3P25713 68 aa3.43□□□□□ -1.86
SSR4-205ENST00000447375 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.87
SSR4-205ENST00000447375 SVIPQ8NHG7 77 aa3.21□□□□□ -1.9
SSR4-205ENST00000447375 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
SSR4-205ENST00000447375 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
SSR4-205ENST00000447375 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
SSR4-205ENST00000447375 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
SSR4-205ENST00000447375 LUZP6Q538Z0 58 aa3□□□□□ -1.93
SSR4-205ENST00000447375 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SSR4-205ENST00000447375 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
SSR4-205ENST00000447375 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
SSR4-205ENST00000447375 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
SSR4-205ENST00000447375 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
SSR4-205ENST00000447375 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
SSR4-205ENST00000447375 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
SSR4-205ENST00000447375 H3BS24 57 aa2.6□□□□□ -1.99
SSR4-205ENST00000447375 NDUFAF8A1L188 74 aa2.53□□□□□ -2
SSR4-205ENST00000447375 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
SSR4-205ENST00000447375 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
SSR4-205ENST00000447375 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SSR4-205ENST00000447375 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
SSR4-205ENST00000447375 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
SSR4-205ENST00000447375 PRM1P04553 51 aa2.16□□□□□ -2.06
SSR4-205ENST00000447375 INE1O15225 51 aa2.06□□□□□ -2.08
SSR4-205ENST00000447375 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 7.2 ms