RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
LRRC28-203ENST00000447360 R4GN34 69 aa2.8□□□□□ -1.96
LRRC28-203ENST00000447360 M0QZ58 72 aa2.79□□□□□ -1.96
LRRC28-203ENST00000447360 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
LRRC28-203ENST00000447360 CYSTM1Q9H1C7 97 aa2.79□□□□□ -1.96
LRRC28-203ENST00000447360 A8MU10 97 aa2.76□□□□□ -1.97
LRRC28-203ENST00000447360 CHKB-CPT1BH3BT56 60 aa2.75□□□□□ -1.97
LRRC28-203ENST00000447360 COA5Q86WW8 74 aa2.75□□□□□ -1.97
LRRC28-203ENST00000447360 LINC01554Q52M75 96 aa2.74□□□□□ -1.97
LRRC28-203ENST00000447360 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
LRRC28-203ENST00000447360 SERP1Q9Y6X1 66 aa2.74□□□□□ -1.97
LRRC28-203ENST00000447360 MT4P47944 62 aa2.73□□□□□ -1.97
LRRC28-203ENST00000447360 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
LRRC28-203ENST00000447360 RPS28P62857 69 aaKnown RBP2.72□□□□□ -1.97
LRRC28-203ENST00000447360 A6NED7 52 aa2.7□□□□□ -1.98
LRRC28-203ENST00000447360 SPINT4Q6UDR6 99 aa2.7□□□□□ -1.98
LRRC28-203ENST00000447360 KRTAP19-3Q7Z4W3 81 aa2.7□□□□□ -1.98
LRRC28-203ENST00000447360 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
LRRC28-203ENST00000447360 PRR15LQ9BU68 103 aa2.66□□□□□ -1.98
LRRC28-203ENST00000447360 MT1EP04732 61 aa2.65□□□□□ -1.99
LRRC28-203ENST00000447360 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
LRRC28-203ENST00000447360 LINC01558Q9Y6Z2 57 aa2.65□□□□□ -1.99
LRRC28-203ENST00000447360 Q1T7F1 81 aa2.64□□□□□ -1.99
LRRC28-203ENST00000447360 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
LRRC28-203ENST00000447360 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
LRRC28-203ENST00000447360 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
LRRC28-203ENST00000447360 A0A1B0GU69 56 aa2.62□□□□□ -1.99
LRRC28-203ENST00000447360 A0A1B0GU33 70 aa2.61□□□□□ -1.99
LRRC28-203ENST00000447360 MT1GP13640 62 aa2.6□□□□□ -1.99
LRRC28-203ENST00000447360 PP632Q6XCG6 107 aa2.59□□□□□ -1.99
LRRC28-203ENST00000447360 SPATA8Q6RVD6 105 aa2.57□□□□□ -2
LRRC28-203ENST00000447360 A0A0D9SG42 100 aa2.56□□□□□ -2
LRRC28-203ENST00000447360 UQCR11O14957 56 aa2.56□□□□□ -2
LRRC28-203ENST00000447360 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
LRRC28-203ENST00000447360 LCE3CQ5T5A8 94 aa2.56□□□□□ -2
LRRC28-203ENST00000447360 LCE1EQ5T753 118 aa2.56□□□□□ -2
LRRC28-203ENST00000447360 MT1MQ8N339 61 aa2.54□□□□□ -2
LRRC28-203ENST00000447360 KRTAP12-1P59990 96 aa2.53□□□□□ -2
LRRC28-203ENST00000447360 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
LRRC28-203ENST00000447360 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
LRRC28-203ENST00000447360 MIR22HGQ0VDD5 57 aa2.48□□□□□ -2.01
LRRC28-203ENST00000447360 MT1LQ93083 61 aa2.47□□□□□ -2.01
LRRC28-203ENST00000447360 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
LRRC28-203ENST00000447360 CDC42SE1Q9NRR8 79 aa2.46□□□□□ -2.02
LRRC28-203ENST00000447360 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
LRRC28-203ENST00000447360 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
LRRC28-203ENST00000447360 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
LRRC28-203ENST00000447360 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
LRRC28-203ENST00000447360 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
LRRC28-203ENST00000447360 MUC5ACP98088 5654 aa2.4□□□□□ -2.02
LRRC28-203ENST00000447360 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
LRRC28-203ENST00000447360 TNP1P09430 55 aa2.38□□□□□ -2.03
LRRC28-203ENST00000447360 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
LRRC28-203ENST00000447360 BRK1Q8WUW1 75 aa2.34□□□□□ -2.03
LRRC28-203ENST00000447360 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
LRRC28-203ENST00000447360 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
LRRC28-203ENST00000447360 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
LRRC28-203ENST00000447360 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
LRRC28-203ENST00000447360 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
LRRC28-203ENST00000447360 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
LRRC28-203ENST00000447360 ROMO1P60602 79 aa2.28□□□□□ -2.04
LRRC28-203ENST00000447360 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
LRRC28-203ENST00000447360 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
LRRC28-203ENST00000447360 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
LRRC28-203ENST00000447360 MT1AP04731 61 aa2.09□□□□□ -2.07
LRRC28-203ENST00000447360 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
LRRC28-203ENST00000447360 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
LRRC28-203ENST00000447360 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
LRRC28-203ENST00000447360 INE1O15225 51 aa1.96□□□□□ -2.1
LRRC28-203ENST00000447360 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
LRRC28-203ENST00000447360 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
LRRC28-203ENST00000447360 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
LRRC28-203ENST00000447360 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
LRRC28-203ENST00000447360 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
LRRC28-203ENST00000447360 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
LRRC28-203ENST00000447360 PRM1P04553 51 aa1.13□□□□□ -2.23
LRRC28-203ENST00000447360 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 145.1 ms