RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 KRTAP9-4Q9BYQ2 154 aa6.7□□□□□ -1.34
TRAPPC4-203ENST00000447216 MDN1Q9NU22 5596 aa6.68□□□□□ -1.34
TRAPPC4-203ENST00000447216 KRTAP9-9Q9BYP9 154 aa6.66□□□□□ -1.34
TRAPPC4-203ENST00000447216 PMAIP1Q13794 54 aa6.64□□□□□ -1.35
TRAPPC4-203ENST00000447216 MT1EP04732 61 aa6.63□□□□□ -1.35
TRAPPC4-203ENST00000447216 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
TRAPPC4-203ENST00000447216 SPRR2EP22531 72 aa6.61□□□□□ -1.35
TRAPPC4-203ENST00000447216 SPRR2BP35325 72 aa6.61□□□□□ -1.35
TRAPPC4-203ENST00000447216 SPRR2AP35326 72 aa6.61□□□□□ -1.35
TRAPPC4-203ENST00000447216 LCE1AQ5T7P2 110 aa6.58□□□□□ -1.36
TRAPPC4-203ENST00000447216 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
TRAPPC4-203ENST00000447216 NEBP20929 6669 aa6.55□□□□□ -1.36
TRAPPC4-203ENST00000447216 KRTAP12-3P60328 96 aa6.54□□□□□ -1.36
TRAPPC4-203ENST00000447216 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
TRAPPC4-203ENST00000447216 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
TRAPPC4-203ENST00000447216 MT1LQ93083 61 aa6.44□□□□□ -1.38
TRAPPC4-203ENST00000447216 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
TRAPPC4-203ENST00000447216 SPRR2DP22532 72 aa6.37□□□□□ -1.39
TRAPPC4-203ENST00000447216 MT1GP13640 62 aa6.34□□□□□ -1.39
TRAPPC4-203ENST00000447216 PRAC1Q96KF2 57 aa6.33□□□□□ -1.4
TRAPPC4-203ENST00000447216 MT1MQ8N339 61 aa6.28□□□□□ -1.4
TRAPPC4-203ENST00000447216 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.42
TRAPPC4-203ENST00000447216 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
TRAPPC4-203ENST00000447216 KTN1-AS1Q86SY8 53 aa6.2□□□□□ -1.42
TRAPPC4-203ENST00000447216 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
TRAPPC4-203ENST00000447216 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
TRAPPC4-203ENST00000447216 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
TRAPPC4-203ENST00000447216 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
TRAPPC4-203ENST00000447216 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
TRAPPC4-203ENST00000447216 DSTQ03001 7570 aaKnown RBP6.05□□□□□ -1.44
TRAPPC4-203ENST00000447216 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
TRAPPC4-203ENST00000447216 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
TRAPPC4-203ENST00000447216 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
TRAPPC4-203ENST00000447216 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
TRAPPC4-203ENST00000447216 KRTAP9-6A8MVA2 160 aa5.77□□□□□ -1.49
TRAPPC4-203ENST00000447216 NDUFAF8A1L188 74 aa5.68□□□□□ -1.5
TRAPPC4-203ENST00000447216 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC4-203ENST00000447216 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
TRAPPC4-203ENST00000447216 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
TRAPPC4-203ENST00000447216 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.51
TRAPPC4-203ENST00000447216 MT4P47944 62 aa5.55□□□□□ -1.52
TRAPPC4-203ENST00000447216 MT3P25713 68 aa5.48□□□□□ -1.53
TRAPPC4-203ENST00000447216 MT1AP04731 61 aa5.47□□□□□ -1.53
TRAPPC4-203ENST00000447216 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
TRAPPC4-203ENST00000447216 HMCN1Q96RW7 5635 aa5.44□□□□□ -1.54
TRAPPC4-203ENST00000447216 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.54
TRAPPC4-203ENST00000447216 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
TRAPPC4-203ENST00000447216 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
TRAPPC4-203ENST00000447216 LUZP6Q538Z0 58 aa5.16□□□□□ -1.58
TRAPPC4-203ENST00000447216 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
TRAPPC4-203ENST00000447216 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
TRAPPC4-203ENST00000447216 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
TRAPPC4-203ENST00000447216 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
TRAPPC4-203ENST00000447216 LCE1FQ5T754 118 aa5.03□□□□□ -1.6
TRAPPC4-203ENST00000447216 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
TRAPPC4-203ENST00000447216 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
TRAPPC4-203ENST00000447216 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
TRAPPC4-203ENST00000447216 KRTAP5-7Q6L8G8 165 aa4.55□□□□□ -1.68
TRAPPC4-203ENST00000447216 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
TRAPPC4-203ENST00000447216 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
TRAPPC4-203ENST00000447216 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
TRAPPC4-203ENST00000447216 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
TRAPPC4-203ENST00000447216 MUC5ACP98088 5654 aa4.35□□□□□ -1.71
TRAPPC4-203ENST00000447216 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
TRAPPC4-203ENST00000447216 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
TRAPPC4-203ENST00000447216 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC4-203ENST00000447216 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
TRAPPC4-203ENST00000447216 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
TRAPPC4-203ENST00000447216 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
TRAPPC4-203ENST00000447216 INE1O15225 51 aa3.85□□□□□ -1.79
TRAPPC4-203ENST00000447216 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC4-203ENST00000447216 PRM1P04553 51 aa3.58□□□□□ -1.84
TRAPPC4-203ENST00000447216 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
TRAPPC4-203ENST00000447216 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
TRAPPC4-203ENST00000447216 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
TRAPPC4-203ENST00000447216 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
TRAPPC4-203ENST00000447216 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
TRAPPC4-203ENST00000447216 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 100.8 ms