RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
LIN54-203ENST00000446851 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
LIN54-203ENST00000446851 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
LIN54-203ENST00000446851 MT1EP04732 61 aa3.72□□□□□ -1.81
LIN54-203ENST00000446851 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
LIN54-203ENST00000446851 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
LIN54-203ENST00000446851 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
LIN54-203ENST00000446851 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.82
LIN54-203ENST00000446851 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
LIN54-203ENST00000446851 MT1LQ93083 61 aa3.61□□□□□ -1.83
LIN54-203ENST00000446851 MT1GP13640 62 aa3.61□□□□□ -1.83
LIN54-203ENST00000446851 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
LIN54-203ENST00000446851 H3BS24 57 aa3.6□□□□□ -1.83
LIN54-203ENST00000446851 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
LIN54-203ENST00000446851 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
LIN54-203ENST00000446851 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
LIN54-203ENST00000446851 MT1MQ8N339 61 aa3.55□□□□□ -1.84
LIN54-203ENST00000446851 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
LIN54-203ENST00000446851 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
LIN54-203ENST00000446851 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.84
LIN54-203ENST00000446851 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
LIN54-203ENST00000446851 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
LIN54-203ENST00000446851 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
LIN54-203ENST00000446851 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
LIN54-203ENST00000446851 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
LIN54-203ENST00000446851 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
LIN54-203ENST00000446851 MT4P47944 62 aa3.43□□□□□ -1.86
LIN54-203ENST00000446851 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
LIN54-203ENST00000446851 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
LIN54-203ENST00000446851 KRTAP19-4Q3LI73 84 aa3.23□□□□□ -1.89
LIN54-203ENST00000446851 LCE1DQ5T752 114 aa3.21□□□□□ -1.9
LIN54-203ENST00000446851 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
LIN54-203ENST00000446851 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
LIN54-203ENST00000446851 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
LIN54-203ENST00000446851 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
LIN54-203ENST00000446851 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
LIN54-203ENST00000446851 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
LIN54-203ENST00000446851 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
LIN54-203ENST00000446851 MT1AP04731 61 aa3.05□□□□□ -1.92
LIN54-203ENST00000446851 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
LIN54-203ENST00000446851 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
LIN54-203ENST00000446851 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
LIN54-203ENST00000446851 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
LIN54-203ENST00000446851 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
LIN54-203ENST00000446851 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
LIN54-203ENST00000446851 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
LIN54-203ENST00000446851 MT3P25713 68 aa2.88□□□□□ -1.95
LIN54-203ENST00000446851 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
LIN54-203ENST00000446851 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
LIN54-203ENST00000446851 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
LIN54-203ENST00000446851 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
LIN54-203ENST00000446851 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
LIN54-203ENST00000446851 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
LIN54-203ENST00000446851 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.98
LIN54-203ENST00000446851 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
LIN54-203ENST00000446851 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
LIN54-203ENST00000446851 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
LIN54-203ENST00000446851 KRTAP5-8O75690 187 aa2.54□□□□□ -2
LIN54-203ENST00000446851 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
LIN54-203ENST00000446851 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
LIN54-203ENST00000446851 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
LIN54-203ENST00000446851 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
LIN54-203ENST00000446851 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
LIN54-203ENST00000446851 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
LIN54-203ENST00000446851 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
LIN54-203ENST00000446851 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
LIN54-203ENST00000446851 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
LIN54-203ENST00000446851 INE1O15225 51 aa2.2□□□□□ -2.06
LIN54-203ENST00000446851 PRM1P04553 51 aa2.15□□□□□ -2.07
LIN54-203ENST00000446851 LCE1FQ5T754 118 aa2.09□□□□□ -2.07
LIN54-203ENST00000446851 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
LIN54-203ENST00000446851 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
LIN54-203ENST00000446851 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
LIN54-203ENST00000446851 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
LIN54-203ENST00000446851 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
LIN54-203ENST00000446851 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
LIN54-203ENST00000446851 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 8.3 ms