RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 SPANXA2-OT1Q8N9U9 137 aa7.76□□□□□ -1.17
NUP50-211ENST00000445721 A0A1B0GU33 70 aa7.74□□□□□ -1.17
NUP50-211ENST00000445721 TNP1P09430 55 aa7.73□□□□□ -1.17
NUP50-211ENST00000445721 KRTAP12-3P60328 96 aa7.63□□□□□ -1.19
NUP50-211ENST00000445721 COA5Q86WW8 74 aa7.63□□□□□ -1.19
NUP50-211ENST00000445721 SYNE1Q8NF91 8797 aaKnown RBP7.6□□□□□ -1.19
NUP50-211ENST00000445721 KRTAP4-11Q9BYQ6 195 aa7.56□□□□□ -1.2
NUP50-211ENST00000445721 LOC100996750A0A140TA64 210 aa7.55□□□□□ -1.2
NUP50-211ENST00000445721 SMIM26A0A096LP01 95 aa7.52□□□□□ -1.21
NUP50-211ENST00000445721 A8MU10 97 aa7.5□□□□□ -1.21
NUP50-211ENST00000445721 AHNAKQ09666 5890 aaKnown RBP7.49□□□□□ -1.21
NUP50-211ENST00000445721 SERP2Q8N6R1 65 aa7.48□□□□□ -1.21
NUP50-211ENST00000445721 MUC5ACP98088 5654 aa7.42□□□□□ -1.22
NUP50-211ENST00000445721 MUC5BQ9HC84 5762 aaPredicted RBP7.4□□□□□ -1.23
NUP50-211ENST00000445721 COX7CP15954 63 aa7.33□□□□□ -1.24
NUP50-211ENST00000445721 KRTAP5-8O75690 187 aa7.32□□□□□ -1.24
NUP50-211ENST00000445721 KRTAP5-2Q701N4 177 aa7.3□□□□□ -1.24
NUP50-211ENST00000445721 A0A1B0GU69 56 aa7.26□□□□□ -1.25
NUP50-211ENST00000445721 ANAPC13Q9BS18 74 aa7.22□□□□□ -1.25
NUP50-211ENST00000445721 H7BZZ5 65 aa7.18□□□□□ -1.26
NUP50-211ENST00000445721 KRTAP6-1Q3LI64 71 aa7.11□□□□□ -1.27
NUP50-211ENST00000445721 CCDC179H3BU77 68 aa7.1□□□□□ -1.27
NUP50-211ENST00000445721 KRTAP19-4Q3LI73 84 aa7.09□□□□□ -1.27
NUP50-211ENST00000445721 KRTAP9-9Q9BYP9 154 aa7.09□□□□□ -1.27
NUP50-211ENST00000445721 MT1AP04731 61 aa7.07□□□□□ -1.28
NUP50-211ENST00000445721 OBSCNQ5VST9 7968 aa6.99□□□□□ -1.29
NUP50-211ENST00000445721 LCE3CQ5T5A8 94 aa6.95□□□□□ -1.3
NUP50-211ENST00000445721 KRTAP25-1Q3LHN0 102 aa6.93□□□□□ -1.3
NUP50-211ENST00000445721 KRTAP6-2Q3LI66 62 aa6.93□□□□□ -1.3
NUP50-211ENST00000445721 KRTAP9-4Q9BYQ2 154 aa6.92□□□□□ -1.3
NUP50-211ENST00000445721 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
NUP50-211ENST00000445721 ATP5EP56381 51 aaPredicted RBP6.87□□□□□ -1.31
NUP50-211ENST00000445721 TMEM258P61165 79 aa6.82□□□□□ -1.32
NUP50-211ENST00000445721 PRR15LQ9BU68 103 aa6.81□□□□□ -1.32
NUP50-211ENST00000445721 KRTAP5-1Q6L8H4 278 aa6.69□□□□□ -1.34
NUP50-211ENST00000445721 LINC01558Q9Y6Z2 57 aa6.61□□□□□ -1.35
NUP50-211ENST00000445721 KRTAP9-6A8MVA2 160 aa6.58□□□□□ -1.36
NUP50-211ENST00000445721 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
NUP50-211ENST00000445721 UQCR11O14957 56 aa6.56□□□□□ -1.36
NUP50-211ENST00000445721 PCP4P48539 62 aa6.55□□□□□ -1.36
NUP50-211ENST00000445721 SVIPQ8NHG7 77 aa6.54□□□□□ -1.36
NUP50-211ENST00000445721 MT3P25713 68 aa6.51□□□□□ -1.37
NUP50-211ENST00000445721 K7ERS5 55 aa6.39□□□□□ -1.39
NUP50-211ENST00000445721 Q1T7F1 81 aa6.38□□□□□ -1.39
NUP50-211ENST00000445721 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
NUP50-211ENST00000445721 V9GYY9 64 aa6.36□□□□□ -1.39
NUP50-211ENST00000445721 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
NUP50-211ENST00000445721 PSPHP1O15172 72 aa6.31□□□□□ -1.4
NUP50-211ENST00000445721 LCE1EQ5T753 118 aa6.13□□□□□ -1.43
NUP50-211ENST00000445721 A6NED7 52 aa6.09□□□□□ -1.43
NUP50-211ENST00000445721 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
NUP50-211ENST00000445721 LCE1BQ5T7P3 118 aa5.9□□□□□ -1.46
NUP50-211ENST00000445721 KRTAP4-2Q9BYR5 136 aa5.88□□□□□ -1.47
NUP50-211ENST00000445721 ROMO1P60602 79 aa5.8□□□□□ -1.48
NUP50-211ENST00000445721 LCE1CQ5T751 118 aa5.7□□□□□ -1.5
NUP50-211ENST00000445721 KRTAP4-12Q9BQ66 201 aa5.66□□□□□ -1.5
NUP50-211ENST00000445721 BRK1Q8WUW1 75 aa5.57□□□□□ -1.52
NUP50-211ENST00000445721 KRTAP5-11Q6L8G4 156 aa5.3□□□□□ -1.56
NUP50-211ENST00000445721 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
NUP50-211ENST00000445721 LCE1FQ5T754 118 aa5.24□□□□□ -1.57
NUP50-211ENST00000445721 PRO0628Q9UI54 55 aa5.23□□□□□ -1.57
NUP50-211ENST00000445721 PHGR1C9JFL3 82 aa5.14□□□□□ -1.59
NUP50-211ENST00000445721 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.07□□□□□ -1.6
NUP50-211ENST00000445721 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
NUP50-211ENST00000445721 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
NUP50-211ENST00000445721 KTN1-AS1Q86SY8 53 aa4.84□□□□□ -1.63
NUP50-211ENST00000445721 KRTAP21-2Q3LI59 83 aa4.67□□□□□ -1.66
NUP50-211ENST00000445721 H3BS24 57 aa4.53□□□□□ -1.68
NUP50-211ENST00000445721 KRTAP4-4Q9BYR3 166 aa4.45□□□□□ -1.7
NUP50-211ENST00000445721 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
NUP50-211ENST00000445721 MUC19Q7Z5P9 8384 aa4.36□□□□□ -1.71
NUP50-211ENST00000445721 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
NUP50-211ENST00000445721 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
NUP50-211ENST00000445721 KRTAP21-1Q3LI58 79 aa3.9□□□□□ -1.79
NUP50-211ENST00000445721 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
NUP50-211ENST00000445721 INE1O15225 51 aa3.31□□□□□ -1.88
NUP50-211ENST00000445721 MUC16Q8WXI7 14507 aa3.11□□□□□ -1.91
NUP50-211ENST00000445721 PRM1P04553 51 aa2.95□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 10.6 ms