RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
UBE2F-216ENST00000445676 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
UBE2F-216ENST00000445676 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
UBE2F-216ENST00000445676 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
UBE2F-216ENST00000445676 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
UBE2F-216ENST00000445676 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
UBE2F-216ENST00000445676 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
UBE2F-216ENST00000445676 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
UBE2F-216ENST00000445676 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
UBE2F-216ENST00000445676 PCP4L1A6NKN8 68 aa4.72□□□□□ -1.65
UBE2F-216ENST00000445676 TNP1P09430 55 aa4.72□□□□□ -1.65
UBE2F-216ENST00000445676 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
UBE2F-216ENST00000445676 SNURFQ9Y675 71 aa4.69□□□□□ -1.66
UBE2F-216ENST00000445676 A0A1B0GU33 70 aa4.68□□□□□ -1.66
UBE2F-216ENST00000445676 SPANXA2-OT1Q8N9U9 137 aa4.68□□□□□ -1.66
UBE2F-216ENST00000445676 SERP1Q9Y6X1 66 aa4.68□□□□□ -1.66
UBE2F-216ENST00000445676 SEC61GP60059 68 aa4.66□□□□□ -1.66
UBE2F-216ENST00000445676 KRTAP5-8O75690 187 aa4.64□□□□□ -1.67
UBE2F-216ENST00000445676 SMIM20Q8N5G0 67 aa4.64□□□□□ -1.67
UBE2F-216ENST00000445676 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
UBE2F-216ENST00000445676 COA5Q86WW8 74 aa4.61□□□□□ -1.67
UBE2F-216ENST00000445676 A8MU10 97 aa4.56□□□□□ -1.68
UBE2F-216ENST00000445676 J3QR89 54 aa4.54□□□□□ -1.68
UBE2F-216ENST00000445676 SMIM26A0A096LP01 95 aa4.53□□□□□ -1.68
UBE2F-216ENST00000445676 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
UBE2F-216ENST00000445676 A0A1B0GV90 55 aa4.44□□□□□ -1.7
UBE2F-216ENST00000445676 MT1AP04731 61 aa4.42□□□□□ -1.7
UBE2F-216ENST00000445676 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
UBE2F-216ENST00000445676 A0A1B0GU69 56 aa4.35□□□□□ -1.71
UBE2F-216ENST00000445676 SERP2Q8N6R1 65 aa4.34□□□□□ -1.71
UBE2F-216ENST00000445676 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
UBE2F-216ENST00000445676 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
UBE2F-216ENST00000445676 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
UBE2F-216ENST00000445676 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
UBE2F-216ENST00000445676 H7BZZ5 65 aa4.15□□□□□ -1.75
UBE2F-216ENST00000445676 K7ERU9 68 aa4.12□□□□□ -1.75
UBE2F-216ENST00000445676 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
UBE2F-216ENST00000445676 PRR15LQ9BU68 103 aa4.06□□□□□ -1.76
UBE2F-216ENST00000445676 COX7CP15954 63 aa4.05□□□□□ -1.76
UBE2F-216ENST00000445676 MT3P25713 68 aa4.03□□□□□ -1.76
UBE2F-216ENST00000445676 LINC01558Q9Y6Z2 57 aa3.93□□□□□ -1.78
UBE2F-216ENST00000445676 UQCR11O14957 56 aa3.91□□□□□ -1.78
UBE2F-216ENST00000445676 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
UBE2F-216ENST00000445676 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
UBE2F-216ENST00000445676 MIR22HGQ0VDD5 57 aa3.78□□□□□ -1.8
UBE2F-216ENST00000445676 K7ERS5 55 aa3.77□□□□□ -1.81
UBE2F-216ENST00000445676 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
UBE2F-216ENST00000445676 ATP5EP56381 51 aaPredicted RBP3.67□□□□□ -1.82
UBE2F-216ENST00000445676 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
UBE2F-216ENST00000445676 RPS28P62857 69 aaKnown RBP3.65□□□□□ -1.83
UBE2F-216ENST00000445676 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
UBE2F-216ENST00000445676 ANAPC13Q9BS18 74 aa3.6□□□□□ -1.83
UBE2F-216ENST00000445676 CCDC179H3BU77 68 aa3.59□□□□□ -1.83
UBE2F-216ENST00000445676 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
UBE2F-216ENST00000445676 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
UBE2F-216ENST00000445676 Q1T7F1 81 aa3.49□□□□□ -1.85
UBE2F-216ENST00000445676 ROMO1P60602 79 aa3.45□□□□□ -1.86
UBE2F-216ENST00000445676 PSPHP1O15172 72 aa3.43□□□□□ -1.86
UBE2F-216ENST00000445676 TMEM258P61165 79 aa3.38□□□□□ -1.87
UBE2F-216ENST00000445676 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
UBE2F-216ENST00000445676 V9GYY9 64 aa3.28□□□□□ -1.88
UBE2F-216ENST00000445676 A6NED7 52 aa3.26□□□□□ -1.89
UBE2F-216ENST00000445676 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
UBE2F-216ENST00000445676 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
UBE2F-216ENST00000445676 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
UBE2F-216ENST00000445676 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
UBE2F-216ENST00000445676 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
UBE2F-216ENST00000445676 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
UBE2F-216ENST00000445676 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
UBE2F-216ENST00000445676 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
UBE2F-216ENST00000445676 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
UBE2F-216ENST00000445676 BRK1Q8WUW1 75 aa2.15□□□□□ -2.07
UBE2F-216ENST00000445676 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
UBE2F-216ENST00000445676 PRO0628Q9UI54 55 aa1.98□□□□□ -2.09
UBE2F-216ENST00000445676 PMAIP1Q13794 54 aa1.96□□□□□ -2.1
UBE2F-216ENST00000445676 PRM1P04553 51 aa1.76□□□□□ -2.13
UBE2F-216ENST00000445676 KTN1-AS1Q86SY8 53 aa1.38□□□□□ -2.19
UBE2F-216ENST00000445676 INE1O15225 51 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 100.7 ms