RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 A0A0D9SG42 100 aa4.95□□□□□ -1.62
SHANK2-209ENST00000445654 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
SHANK2-209ENST00000445654 PCP4P48539 62 aa4.92□□□□□ -1.62
SHANK2-209ENST00000445654 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
SHANK2-209ENST00000445654 SMIM26A0A096LP01 95 aa4.88□□□□□ -1.63
SHANK2-209ENST00000445654 SPINT4Q6UDR6 99 aa4.88□□□□□ -1.63
SHANK2-209ENST00000445654 MT1LQ93083 61 aa4.87□□□□□ -1.63
SHANK2-209ENST00000445654 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
SHANK2-209ENST00000445654 A8MU10 97 aa4.83□□□□□ -1.64
SHANK2-209ENST00000445654 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
SHANK2-209ENST00000445654 KRTAP4-3Q9BYR4 195 aa4.81□□□□□ -1.64
SHANK2-209ENST00000445654 V9GYY9 64 aa4.81□□□□□ -1.64
SHANK2-209ENST00000445654 UQCR11O14957 56 aa4.79□□□□□ -1.64
SHANK2-209ENST00000445654 Q1T7F1 81 aa4.77□□□□□ -1.65
SHANK2-209ENST00000445654 PSPHP1O15172 72 aa4.76□□□□□ -1.65
SHANK2-209ENST00000445654 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
SHANK2-209ENST00000445654 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
SHANK2-209ENST00000445654 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
SHANK2-209ENST00000445654 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
SHANK2-209ENST00000445654 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
SHANK2-209ENST00000445654 A6NED7 52 aa4.62□□□□□ -1.67
SHANK2-209ENST00000445654 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
SHANK2-209ENST00000445654 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
SHANK2-209ENST00000445654 K7ERS5 55 aa4.6□□□□□ -1.67
SHANK2-209ENST00000445654 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
SHANK2-209ENST00000445654 TNP1P09430 55 aa4.55□□□□□ -1.68
SHANK2-209ENST00000445654 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
SHANK2-209ENST00000445654 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
SHANK2-209ENST00000445654 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
SHANK2-209ENST00000445654 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
SHANK2-209ENST00000445654 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
SHANK2-209ENST00000445654 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
SHANK2-209ENST00000445654 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
SHANK2-209ENST00000445654 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
SHANK2-209ENST00000445654 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
SHANK2-209ENST00000445654 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
SHANK2-209ENST00000445654 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
SHANK2-209ENST00000445654 ROMO1P60602 79 aa4.3□□□□□ -1.72
SHANK2-209ENST00000445654 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
SHANK2-209ENST00000445654 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
SHANK2-209ENST00000445654 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
SHANK2-209ENST00000445654 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
SHANK2-209ENST00000445654 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
SHANK2-209ENST00000445654 MT1AP04731 61 aa4.16□□□□□ -1.74
SHANK2-209ENST00000445654 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
SHANK2-209ENST00000445654 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
SHANK2-209ENST00000445654 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
SHANK2-209ENST00000445654 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
SHANK2-209ENST00000445654 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
SHANK2-209ENST00000445654 PMAIP1Q13794 54 aa4□□□□□ -1.77
SHANK2-209ENST00000445654 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
SHANK2-209ENST00000445654 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
SHANK2-209ENST00000445654 MT3P25713 68 aa3.87□□□□□ -1.79
SHANK2-209ENST00000445654 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
SHANK2-209ENST00000445654 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
SHANK2-209ENST00000445654 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
SHANK2-209ENST00000445654 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
SHANK2-209ENST00000445654 H3BS24 57 aa3.63□□□□□ -1.83
SHANK2-209ENST00000445654 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SHANK2-209ENST00000445654 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
SHANK2-209ENST00000445654 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
SHANK2-209ENST00000445654 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
SHANK2-209ENST00000445654 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SHANK2-209ENST00000445654 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
SHANK2-209ENST00000445654 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
SHANK2-209ENST00000445654 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
SHANK2-209ENST00000445654 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
SHANK2-209ENST00000445654 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
SHANK2-209ENST00000445654 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
SHANK2-209ENST00000445654 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
SHANK2-209ENST00000445654 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
SHANK2-209ENST00000445654 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
SHANK2-209ENST00000445654 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
SHANK2-209ENST00000445654 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SHANK2-209ENST00000445654 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
SHANK2-209ENST00000445654 INE1O15225 51 aa2.39□□□□□ -2.03
SHANK2-209ENST00000445654 PRM1P04553 51 aa2.21□□□□□ -2.06
SHANK2-209ENST00000445654 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 72.2 ms