RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
NCLP1-201ENST00000445357 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.55
NCLP1-201ENST00000445357 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
NCLP1-201ENST00000445357 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
NCLP1-201ENST00000445357 KRTAP19-6Q3LI70 58 aa5.3□□□□□ -1.56
NCLP1-201ENST00000445357 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
NCLP1-201ENST00000445357 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
NCLP1-201ENST00000445357 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
NCLP1-201ENST00000445357 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
NCLP1-201ENST00000445357 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
NCLP1-201ENST00000445357 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
NCLP1-201ENST00000445357 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
NCLP1-201ENST00000445357 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
NCLP1-201ENST00000445357 KMT2DO14686 5537 aa5.11□□□□□ -1.59
NCLP1-201ENST00000445357 MT1EP04732 61 aa5□□□□□ -1.61
NCLP1-201ENST00000445357 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
NCLP1-201ENST00000445357 MT1LQ93083 61 aa4.96□□□□□ -1.61
NCLP1-201ENST00000445357 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
NCLP1-201ENST00000445357 MUC12Q9UKN1 5478 aa4.91□□□□□ -1.62
NCLP1-201ENST00000445357 NEBP20929 6669 aa4.86□□□□□ -1.63
NCLP1-201ENST00000445357 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
NCLP1-201ENST00000445357 INE1O15225 51 aa4.78□□□□□ -1.64
NCLP1-201ENST00000445357 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
NCLP1-201ENST00000445357 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
NCLP1-201ENST00000445357 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
NCLP1-201ENST00000445357 KRTAP2-1Q9BYU5 128 aa4.73□□□□□ -1.65
NCLP1-201ENST00000445357 KRTAP19-3Q7Z4W3 81 aa4.71□□□□□ -1.66
NCLP1-201ENST00000445357 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
NCLP1-201ENST00000445357 MT1GP13640 62 aa4.7□□□□□ -1.66
NCLP1-201ENST00000445357 MT1MQ8N339 61 aa4.68□□□□□ -1.66
NCLP1-201ENST00000445357 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
NCLP1-201ENST00000445357 SPRR2EP22531 72 aa4.62□□□□□ -1.67
NCLP1-201ENST00000445357 SPRR2BP35325 72 aa4.62□□□□□ -1.67
NCLP1-201ENST00000445357 SPRR2AP35326 72 aa4.62□□□□□ -1.67
NCLP1-201ENST00000445357 KRTAP20-1Q3LI63 56 aa4.62□□□□□ -1.67
NCLP1-201ENST00000445357 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
NCLP1-201ENST00000445357 SPRR2DP22532 72 aa4.46□□□□□ -1.7
NCLP1-201ENST00000445357 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
NCLP1-201ENST00000445357 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
NCLP1-201ENST00000445357 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
NCLP1-201ENST00000445357 MT1AP04731 61 aa4.21□□□□□ -1.74
NCLP1-201ENST00000445357 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
NCLP1-201ENST00000445357 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
NCLP1-201ENST00000445357 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
NCLP1-201ENST00000445357 MT3P25713 68 aa4.01□□□□□ -1.77
NCLP1-201ENST00000445357 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.77
NCLP1-201ENST00000445357 MT4P47944 62 aa3.93□□□□□ -1.78
NCLP1-201ENST00000445357 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
NCLP1-201ENST00000445357 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
NCLP1-201ENST00000445357 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
NCLP1-201ENST00000445357 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
NCLP1-201ENST00000445357 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
NCLP1-201ENST00000445357 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
NCLP1-201ENST00000445357 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
NCLP1-201ENST00000445357 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
NCLP1-201ENST00000445357 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.82
NCLP1-201ENST00000445357 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
NCLP1-201ENST00000445357 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
NCLP1-201ENST00000445357 PRM1P04553 51 aa3.58□□□□□ -1.84
NCLP1-201ENST00000445357 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
NCLP1-201ENST00000445357 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
NCLP1-201ENST00000445357 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
NCLP1-201ENST00000445357 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
NCLP1-201ENST00000445357 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
NCLP1-201ENST00000445357 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
NCLP1-201ENST00000445357 MUC5ACP98088 5654 aa3.09□□□□□ -1.92
NCLP1-201ENST00000445357 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
NCLP1-201ENST00000445357 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
NCLP1-201ENST00000445357 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
NCLP1-201ENST00000445357 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
NCLP1-201ENST00000445357 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
NCLP1-201ENST00000445357 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.97
NCLP1-201ENST00000445357 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
NCLP1-201ENST00000445357 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
NCLP1-201ENST00000445357 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
NCLP1-201ENST00000445357 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
NCLP1-201ENST00000445357 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 49.2 ms