RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
LRRC42-204ENST00000444987 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
LRRC42-204ENST00000444987 K7ERS5 55 aa6.79□□□□□ -1.32
LRRC42-204ENST00000444987 MT1LQ93083 61 aa6.75□□□□□ -1.33
LRRC42-204ENST00000444987 DSTQ03001 7570 aaKnown RBP6.73□□□□□ -1.33
LRRC42-204ENST00000444987 KRTAP25-1Q3LHN0 102 aa6.7□□□□□ -1.34
LRRC42-204ENST00000444987 MT1MQ8N339 61 aa6.68□□□□□ -1.34
LRRC42-204ENST00000444987 A6NED7 52 aa6.66□□□□□ -1.34
LRRC42-204ENST00000444987 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
LRRC42-204ENST00000444987 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
LRRC42-204ENST00000444987 CDC42SE1Q9NRR8 79 aa6.47□□□□□ -1.37
LRRC42-204ENST00000444987 LCE4AQ5TA78 99 aa6.44□□□□□ -1.38
LRRC42-204ENST00000444987 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
LRRC42-204ENST00000444987 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
LRRC42-204ENST00000444987 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
LRRC42-204ENST00000444987 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
LRRC42-204ENST00000444987 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
LRRC42-204ENST00000444987 KRTAP5-4Q6L8H1 288 aa6.33□□□□□ -1.4
LRRC42-204ENST00000444987 ROMO1P60602 79 aa6.31□□□□□ -1.4
LRRC42-204ENST00000444987 MT4P47944 62 aa6.25□□□□□ -1.41
LRRC42-204ENST00000444987 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
LRRC42-204ENST00000444987 HMCN1Q96RW7 5635 aa6.15□□□□□ -1.42
LRRC42-204ENST00000444987 KRTAP5-5Q701N2 237 aaPredicted RBP6.13□□□□□ -1.43
LRRC42-204ENST00000444987 GPR98Q8WXG9 6306 aa6.12□□□□□ -1.43
LRRC42-204ENST00000444987 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
LRRC42-204ENST00000444987 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
LRRC42-204ENST00000444987 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
LRRC42-204ENST00000444987 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
LRRC42-204ENST00000444987 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
LRRC42-204ENST00000444987 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
LRRC42-204ENST00000444987 KRTAP20-2Q3LI61 65 aa5.93□□□□□ -1.46
LRRC42-204ENST00000444987 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
LRRC42-204ENST00000444987 KRTAP5-10Q6L8G5 202 aa5.82□□□□□ -1.48
LRRC42-204ENST00000444987 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
LRRC42-204ENST00000444987 MT1AP04731 61 aa5.76□□□□□ -1.49
LRRC42-204ENST00000444987 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
LRRC42-204ENST00000444987 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
LRRC42-204ENST00000444987 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
LRRC42-204ENST00000444987 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
LRRC42-204ENST00000444987 KRTAP5-7Q6L8G8 165 aa5.62□□□□□ -1.51
LRRC42-204ENST00000444987 KRTAP5-2Q701N4 177 aa5.57□□□□□ -1.52
LRRC42-204ENST00000444987 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
LRRC42-204ENST00000444987 PRO0628Q9UI54 55 aa5.54□□□□□ -1.52
LRRC42-204ENST00000444987 PRAC1Q96KF2 57 aa5.41□□□□□ -1.54
LRRC42-204ENST00000444987 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.54
LRRC42-204ENST00000444987 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
LRRC42-204ENST00000444987 MT3P25713 68 aa5.29□□□□□ -1.56
LRRC42-204ENST00000444987 KTN1-AS1Q86SY8 53 aa5.23□□□□□ -1.57
LRRC42-204ENST00000444987 KRTAP5-8O75690 187 aa5.2□□□□□ -1.58
LRRC42-204ENST00000444987 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
LRRC42-204ENST00000444987 H3BS24 57 aa5.11□□□□□ -1.59
LRRC42-204ENST00000444987 SVIPQ8NHG7 77 aa4.98□□□□□ -1.61
LRRC42-204ENST00000444987 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
LRRC42-204ENST00000444987 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
LRRC42-204ENST00000444987 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
LRRC42-204ENST00000444987 MUC5ACP98088 5654 aa4.83□□□□□ -1.64
LRRC42-204ENST00000444987 MUC5BQ9HC84 5762 aaPredicted RBP4.79□□□□□ -1.64
LRRC42-204ENST00000444987 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
LRRC42-204ENST00000444987 KRTAP4-12Q9BQ66 201 aa4.77□□□□□ -1.65
LRRC42-204ENST00000444987 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
LRRC42-204ENST00000444987 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
LRRC42-204ENST00000444987 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
LRRC42-204ENST00000444987 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
LRRC42-204ENST00000444987 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
LRRC42-204ENST00000444987 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
LRRC42-204ENST00000444987 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
LRRC42-204ENST00000444987 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
LRRC42-204ENST00000444987 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
LRRC42-204ENST00000444987 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
LRRC42-204ENST00000444987 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
LRRC42-204ENST00000444987 KRTAP21-2Q3LI59 83 aa3.75□□□□□ -1.81
LRRC42-204ENST00000444987 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
LRRC42-204ENST00000444987 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
LRRC42-204ENST00000444987 PRM1P04553 51 aa3.23□□□□□ -1.89
LRRC42-204ENST00000444987 INE1O15225 51 aa3.19□□□□□ -1.9
LRRC42-204ENST00000444987 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
LRRC42-204ENST00000444987 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
LRRC42-204ENST00000444987 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms