RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
CCNE1-203ENST00000444983 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
CCNE1-203ENST00000444983 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
CCNE1-203ENST00000444983 MUC12Q9UKN1 5478 aa5.51□□□□□ -1.53
CCNE1-203ENST00000444983 LUZP6Q538Z0 58 aa5.51□□□□□ -1.53
CCNE1-203ENST00000444983 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
CCNE1-203ENST00000444983 MDN1Q9NU22 5596 aa5.43□□□□□ -1.54
CCNE1-203ENST00000444983 SPRR2EP22531 72 aa5.43□□□□□ -1.54
CCNE1-203ENST00000444983 SPRR2BP35325 72 aa5.43□□□□□ -1.54
CCNE1-203ENST00000444983 SPRR2AP35326 72 aa5.43□□□□□ -1.54
CCNE1-203ENST00000444983 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
CCNE1-203ENST00000444983 MT1LQ93083 61 aa5.41□□□□□ -1.54
CCNE1-203ENST00000444983 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
CCNE1-203ENST00000444983 NEBP20929 6669 aa5.37□□□□□ -1.55
CCNE1-203ENST00000444983 MT1GP13640 62 aa5.34□□□□□ -1.55
CCNE1-203ENST00000444983 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
CCNE1-203ENST00000444983 MT1MQ8N339 61 aa5.26□□□□□ -1.57
CCNE1-203ENST00000444983 SPRR2DP22532 72 aa5.24□□□□□ -1.57
CCNE1-203ENST00000444983 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
CCNE1-203ENST00000444983 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
CCNE1-203ENST00000444983 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
CCNE1-203ENST00000444983 DSTQ03001 7570 aaKnown RBP5.11□□□□□ -1.59
CCNE1-203ENST00000444983 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
CCNE1-203ENST00000444983 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
CCNE1-203ENST00000444983 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
CCNE1-203ENST00000444983 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
CCNE1-203ENST00000444983 KRTAP20-1Q3LI63 56 aa5.07□□□□□ -1.6
CCNE1-203ENST00000444983 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
CCNE1-203ENST00000444983 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
CCNE1-203ENST00000444983 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
CCNE1-203ENST00000444983 INE1O15225 51 aa4.88□□□□□ -1.63
CCNE1-203ENST00000444983 KRTAP5-5Q701N2 237 aaPredicted RBP4.82□□□□□ -1.64
CCNE1-203ENST00000444983 KRTAP4-12Q9BQ66 201 aa4.8□□□□□ -1.64
CCNE1-203ENST00000444983 KRTAP5-4Q6L8H1 288 aa4.75□□□□□ -1.65
CCNE1-203ENST00000444983 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
CCNE1-203ENST00000444983 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
CCNE1-203ENST00000444983 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
CCNE1-203ENST00000444983 MT1AP04731 61 aa4.6□□□□□ -1.67
CCNE1-203ENST00000444983 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
CCNE1-203ENST00000444983 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
CCNE1-203ENST00000444983 MT4P47944 62 aa4.55□□□□□ -1.68
CCNE1-203ENST00000444983 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
CCNE1-203ENST00000444983 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
CCNE1-203ENST00000444983 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
CCNE1-203ENST00000444983 GPR98Q8WXG9 6306 aa4.45□□□□□ -1.7
CCNE1-203ENST00000444983 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
CCNE1-203ENST00000444983 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
CCNE1-203ENST00000444983 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
CCNE1-203ENST00000444983 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
CCNE1-203ENST00000444983 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
CCNE1-203ENST00000444983 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
CCNE1-203ENST00000444983 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
CCNE1-203ENST00000444983 MT3P25713 68 aa4.16□□□□□ -1.74
CCNE1-203ENST00000444983 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
CCNE1-203ENST00000444983 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
CCNE1-203ENST00000444983 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
CCNE1-203ENST00000444983 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
CCNE1-203ENST00000444983 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
CCNE1-203ENST00000444983 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
CCNE1-203ENST00000444983 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
CCNE1-203ENST00000444983 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
CCNE1-203ENST00000444983 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
CCNE1-203ENST00000444983 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
CCNE1-203ENST00000444983 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
CCNE1-203ENST00000444983 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
CCNE1-203ENST00000444983 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
CCNE1-203ENST00000444983 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
CCNE1-203ENST00000444983 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
CCNE1-203ENST00000444983 PRM1P04553 51 aa3.19□□□□□ -1.9
CCNE1-203ENST00000444983 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
CCNE1-203ENST00000444983 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
CCNE1-203ENST00000444983 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CCNE1-203ENST00000444983 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
CCNE1-203ENST00000444983 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
CCNE1-203ENST00000444983 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
CCNE1-203ENST00000444983 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
CCNE1-203ENST00000444983 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 362.1 ms