RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 LUZP6Q538Z0 58 aa7.03□□□□□ -1.28
SEMA3D-202ENST00000444867 MACF1Q9UPN3 7388 aaKnown RBP6.98□□□□□ -1.29
SEMA3D-202ENST00000444867 KRTAP19-7Q3SYF9 63 aa6.9□□□□□ -1.31
SEMA3D-202ENST00000444867 KMT2DO14686 5537 aa6.87□□□□□ -1.31
SEMA3D-202ENST00000444867 KRTAP4-9Q9BYQ8 210 aa6.87□□□□□ -1.31
SEMA3D-202ENST00000444867 KRTAP9-7A8MTY7 169 aa6.85□□□□□ -1.31
SEMA3D-202ENST00000444867 SYNE2Q8WXH0 6885 aaKnown RBP6.83□□□□□ -1.32
SEMA3D-202ENST00000444867 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
SEMA3D-202ENST00000444867 KRTAP4-2Q9BYR5 136 aa6.78□□□□□ -1.32
SEMA3D-202ENST00000444867 LCE3CQ5T5A8 94 aa6.77□□□□□ -1.33
SEMA3D-202ENST00000444867 MT1EP04732 61 aa6.76□□□□□ -1.33
SEMA3D-202ENST00000444867 KRTAP6-3Q3LI67 103 aa6.68□□□□□ -1.34
SEMA3D-202ENST00000444867 MT1LQ93083 61 aa6.68□□□□□ -1.34
SEMA3D-202ENST00000444867 KRTAP4-11Q9BYQ6 195 aa6.57□□□□□ -1.36
SEMA3D-202ENST00000444867 KRTAP5-9P26371 169 aa6.53□□□□□ -1.36
SEMA3D-202ENST00000444867 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
SEMA3D-202ENST00000444867 MUC12Q9UKN1 5478 aa6.45□□□□□ -1.38
SEMA3D-202ENST00000444867 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
SEMA3D-202ENST00000444867 MT1GP13640 62 aa6.43□□□□□ -1.38
SEMA3D-202ENST00000444867 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
SEMA3D-202ENST00000444867 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
SEMA3D-202ENST00000444867 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
SEMA3D-202ENST00000444867 MT1MQ8N339 61 aa6.36□□□□□ -1.39
SEMA3D-202ENST00000444867 NEBP20929 6669 aa6.33□□□□□ -1.4
SEMA3D-202ENST00000444867 SPRR2EP22531 72 aa6.31□□□□□ -1.4
SEMA3D-202ENST00000444867 SPRR2BP35325 72 aa6.31□□□□□ -1.4
SEMA3D-202ENST00000444867 SPRR2AP35326 72 aa6.31□□□□□ -1.4
SEMA3D-202ENST00000444867 A0A0A0MQY5 61 aa6.3□□□□□ -1.4
SEMA3D-202ENST00000444867 KRTAP5-3Q6L8H2 238 aa6.3□□□□□ -1.4
SEMA3D-202ENST00000444867 LCE5AQ5TCM9 118 aa6.29□□□□□ -1.4
SEMA3D-202ENST00000444867 LCE1AQ5T7P2 110 aa6.25□□□□□ -1.41
SEMA3D-202ENST00000444867 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
SEMA3D-202ENST00000444867 SPRR2DP22532 72 aa6.1□□□□□ -1.43
SEMA3D-202ENST00000444867 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
SEMA3D-202ENST00000444867 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
SEMA3D-202ENST00000444867 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
SEMA3D-202ENST00000444867 KRTAP20-1Q3LI63 56 aa6.05□□□□□ -1.44
SEMA3D-202ENST00000444867 INE1O15225 51 aa5.87□□□□□ -1.47
SEMA3D-202ENST00000444867 KRTAP2-2Q9BYT5 123 aa5.8□□□□□ -1.48
SEMA3D-202ENST00000444867 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
SEMA3D-202ENST00000444867 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
SEMA3D-202ENST00000444867 MT1AP04731 61 aa5.68□□□□□ -1.5
SEMA3D-202ENST00000444867 KRTAP6-1Q3LI64 71 aa5.6□□□□□ -1.51
SEMA3D-202ENST00000444867 MT4P47944 62 aa5.32□□□□□ -1.56
SEMA3D-202ENST00000444867 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
SEMA3D-202ENST00000444867 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
SEMA3D-202ENST00000444867 HMCN1Q96RW7 5635 aa5.23□□□□□ -1.57
SEMA3D-202ENST00000444867 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
SEMA3D-202ENST00000444867 MT3P25713 68 aa5.14□□□□□ -1.59
SEMA3D-202ENST00000444867 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
SEMA3D-202ENST00000444867 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
SEMA3D-202ENST00000444867 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
SEMA3D-202ENST00000444867 LCE3EQ5T5B0 92 aa5.03□□□□□ -1.6
SEMA3D-202ENST00000444867 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
SEMA3D-202ENST00000444867 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
SEMA3D-202ENST00000444867 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
SEMA3D-202ENST00000444867 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
SEMA3D-202ENST00000444867 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
SEMA3D-202ENST00000444867 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
SEMA3D-202ENST00000444867 PRM1P04553 51 aa4.5□□□□□ -1.69
SEMA3D-202ENST00000444867 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
SEMA3D-202ENST00000444867 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
SEMA3D-202ENST00000444867 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
SEMA3D-202ENST00000444867 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
SEMA3D-202ENST00000444867 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
SEMA3D-202ENST00000444867 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
SEMA3D-202ENST00000444867 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
SEMA3D-202ENST00000444867 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
SEMA3D-202ENST00000444867 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
SEMA3D-202ENST00000444867 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.78
SEMA3D-202ENST00000444867 AHNAKQ09666 5890 aaKnown RBP3.85□□□□□ -1.79
SEMA3D-202ENST00000444867 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.8
SEMA3D-202ENST00000444867 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
SEMA3D-202ENST00000444867 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
SEMA3D-202ENST00000444867 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
SEMA3D-202ENST00000444867 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
SEMA3D-202ENST00000444867 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 86.8 ms