RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 KRTAP20-1Q3LI63 56 aa6.46□□□□□ -1.38
CIRBP-203ENST00000444172 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
CIRBP-203ENST00000444172 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
CIRBP-203ENST00000444172 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
CIRBP-203ENST00000444172 KRTAP2-3P0C7H8 128 aa6.4□□□□□ -1.38
CIRBP-203ENST00000444172 KRTAP2-4Q9BYR9 128 aa6.4□□□□□ -1.38
CIRBP-203ENST00000444172 MT1LQ93083 61 aa6.39□□□□□ -1.39
CIRBP-203ENST00000444172 MT1GP13640 62 aa6.37□□□□□ -1.39
CIRBP-203ENST00000444172 PP632Q6XCG6 107 aa6.33□□□□□ -1.4
CIRBP-203ENST00000444172 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
CIRBP-203ENST00000444172 MT1MQ8N339 61 aa6.26□□□□□ -1.41
CIRBP-203ENST00000444172 PMAIP1Q13794 54 aa6.23□□□□□ -1.41
CIRBP-203ENST00000444172 KRTAP2-2Q9BYT5 123 aa6.22□□□□□ -1.41
CIRBP-203ENST00000444172 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
CIRBP-203ENST00000444172 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
CIRBP-203ENST00000444172 DSTQ03001 7570 aaKnown RBP6.15□□□□□ -1.42
CIRBP-203ENST00000444172 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
CIRBP-203ENST00000444172 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
CIRBP-203ENST00000444172 PRO0628Q9UI54 55 aa6.1□□□□□ -1.43
CIRBP-203ENST00000444172 KRTAP19-4Q3LI73 84 aa6.06□□□□□ -1.44
CIRBP-203ENST00000444172 LCE3CQ5T5A8 94 aa5.99□□□□□ -1.45
CIRBP-203ENST00000444172 PRAC1Q96KF2 57 aa5.91□□□□□ -1.46
CIRBP-203ENST00000444172 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
CIRBP-203ENST00000444172 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
CIRBP-203ENST00000444172 LCE4AQ5TA78 99 aa5.75□□□□□ -1.49
CIRBP-203ENST00000444172 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
CIRBP-203ENST00000444172 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
CIRBP-203ENST00000444172 MT4P47944 62 aa5.68□□□□□ -1.5
CIRBP-203ENST00000444172 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
CIRBP-203ENST00000444172 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
CIRBP-203ENST00000444172 KRTAP9-6A8MVA2 160 aa5.62□□□□□ -1.51
CIRBP-203ENST00000444172 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
CIRBP-203ENST00000444172 GPR98Q8WXG9 6306 aa5.5□□□□□ -1.53
CIRBP-203ENST00000444172 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
CIRBP-203ENST00000444172 MT1AP04731 61 aa5.44□□□□□ -1.54
CIRBP-203ENST00000444172 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
CIRBP-203ENST00000444172 HMCN1Q96RW7 5635 aa5.4□□□□□ -1.55
CIRBP-203ENST00000444172 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
CIRBP-203ENST00000444172 KRTAP20-2Q3LI61 65 aa5.37□□□□□ -1.55
CIRBP-203ENST00000444172 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
CIRBP-203ENST00000444172 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
CIRBP-203ENST00000444172 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
CIRBP-203ENST00000444172 AHNAK2Q8IVF2 5795 aa5.09□□□□□ -1.6
CIRBP-203ENST00000444172 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
CIRBP-203ENST00000444172 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
CIRBP-203ENST00000444172 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
CIRBP-203ENST00000444172 MT3P25713 68 aa4.98□□□□□ -1.61
CIRBP-203ENST00000444172 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
CIRBP-203ENST00000444172 KRTAP5-7Q6L8G8 165 aa4.81□□□□□ -1.64
CIRBP-203ENST00000444172 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
CIRBP-203ENST00000444172 H3BS24 57 aa4.76□□□□□ -1.65
CIRBP-203ENST00000444172 A0A0A0MQY5 61 aa4.7□□□□□ -1.66
CIRBP-203ENST00000444172 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
CIRBP-203ENST00000444172 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
CIRBP-203ENST00000444172 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
CIRBP-203ENST00000444172 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
CIRBP-203ENST00000444172 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
CIRBP-203ENST00000444172 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
CIRBP-203ENST00000444172 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
CIRBP-203ENST00000444172 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
CIRBP-203ENST00000444172 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
CIRBP-203ENST00000444172 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.74
CIRBP-203ENST00000444172 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
CIRBP-203ENST00000444172 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
CIRBP-203ENST00000444172 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
CIRBP-203ENST00000444172 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
CIRBP-203ENST00000444172 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
CIRBP-203ENST00000444172 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
CIRBP-203ENST00000444172 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
CIRBP-203ENST00000444172 INE1O15225 51 aa3.62□□□□□ -1.83
CIRBP-203ENST00000444172 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
CIRBP-203ENST00000444172 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
CIRBP-203ENST00000444172 PRM1P04553 51 aa3.42□□□□□ -1.86
CIRBP-203ENST00000444172 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
CIRBP-203ENST00000444172 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
CIRBP-203ENST00000444172 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
CIRBP-203ENST00000444172 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
CIRBP-203ENST00000444172 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms