RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 SYNE2Q8WXH0 6885 aaKnown RBP6.22□□□□□ -1.41
CCDC197-202ENST00000444118 LCE3CQ5T5A8 94 aa6.19□□□□□ -1.42
CCDC197-202ENST00000444118 MT1EP04732 61 aa6.18□□□□□ -1.42
CCDC197-202ENST00000444118 KRTAP6-3Q3LI67 103 aa6.18□□□□□ -1.42
CCDC197-202ENST00000444118 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
CCDC197-202ENST00000444118 MT1LQ93083 61 aa6.1□□□□□ -1.43
CCDC197-202ENST00000444118 KRTAP5-9P26371 169 aa6.03□□□□□ -1.44
CCDC197-202ENST00000444118 KRTAP4-7Q9BYR0 210 aa5.95□□□□□ -1.46
CCDC197-202ENST00000444118 MUC12Q9UKN1 5478 aa5.94□□□□□ -1.46
CCDC197-202ENST00000444118 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
CCDC197-202ENST00000444118 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
CCDC197-202ENST00000444118 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
CCDC197-202ENST00000444118 MT1GP13640 62 aa5.84□□□□□ -1.48
CCDC197-202ENST00000444118 NEBP20929 6669 aa5.82□□□□□ -1.48
CCDC197-202ENST00000444118 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
CCDC197-202ENST00000444118 MT1MQ8N339 61 aa5.8□□□□□ -1.48
CCDC197-202ENST00000444118 SPRR2EP22531 72 aa5.76□□□□□ -1.49
CCDC197-202ENST00000444118 SPRR2BP35325 72 aa5.76□□□□□ -1.49
CCDC197-202ENST00000444118 SPRR2AP35326 72 aa5.76□□□□□ -1.49
CCDC197-202ENST00000444118 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
CCDC197-202ENST00000444118 LCE1AQ5T7P2 110 aa5.73□□□□□ -1.49
CCDC197-202ENST00000444118 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
CCDC197-202ENST00000444118 KRTAP20-1Q3LI63 56 aa5.59□□□□□ -1.51
CCDC197-202ENST00000444118 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
CCDC197-202ENST00000444118 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
CCDC197-202ENST00000444118 KRTAP2-1Q9BYU5 128 aa5.58□□□□□ -1.52
CCDC197-202ENST00000444118 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
CCDC197-202ENST00000444118 SPRR2DP22532 72 aa5.55□□□□□ -1.52
CCDC197-202ENST00000444118 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
CCDC197-202ENST00000444118 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
CCDC197-202ENST00000444118 KRTAP2-2Q9BYT5 123 aa5.36□□□□□ -1.55
CCDC197-202ENST00000444118 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
CCDC197-202ENST00000444118 MT1AP04731 61 aa5.17□□□□□ -1.58
CCDC197-202ENST00000444118 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
CCDC197-202ENST00000444118 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
CCDC197-202ENST00000444118 KRTAP4-6Q9BYQ5 205 aa4.95□□□□□ -1.62
CCDC197-202ENST00000444118 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
CCDC197-202ENST00000444118 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
CCDC197-202ENST00000444118 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
CCDC197-202ENST00000444118 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
CCDC197-202ENST00000444118 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
CCDC197-202ENST00000444118 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
CCDC197-202ENST00000444118 MT4P47944 62 aa4.84□□□□□ -1.63
CCDC197-202ENST00000444118 HMCN1Q96RW7 5635 aa4.73□□□□□ -1.65
CCDC197-202ENST00000444118 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
CCDC197-202ENST00000444118 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
CCDC197-202ENST00000444118 MT3P25713 68 aa4.65□□□□□ -1.67
CCDC197-202ENST00000444118 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
CCDC197-202ENST00000444118 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
CCDC197-202ENST00000444118 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
CCDC197-202ENST00000444118 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.7
CCDC197-202ENST00000444118 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
CCDC197-202ENST00000444118 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
CCDC197-202ENST00000444118 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
CCDC197-202ENST00000444118 PRM1P04553 51 aa4.35□□□□□ -1.71
CCDC197-202ENST00000444118 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
CCDC197-202ENST00000444118 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
CCDC197-202ENST00000444118 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
CCDC197-202ENST00000444118 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
CCDC197-202ENST00000444118 KRTAP5-8O75690 187 aa4□□□□□ -1.77
CCDC197-202ENST00000444118 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
CCDC197-202ENST00000444118 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
CCDC197-202ENST00000444118 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
CCDC197-202ENST00000444118 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
CCDC197-202ENST00000444118 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
CCDC197-202ENST00000444118 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
CCDC197-202ENST00000444118 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
CCDC197-202ENST00000444118 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
CCDC197-202ENST00000444118 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
CCDC197-202ENST00000444118 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
CCDC197-202ENST00000444118 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
CCDC197-202ENST00000444118 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
CCDC197-202ENST00000444118 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
CCDC197-202ENST00000444118 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
CCDC197-202ENST00000444118 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
CCDC197-202ENST00000444118 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
CCDC197-202ENST00000444118 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
CCDC197-202ENST00000444118 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 30.4 ms