RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 CRCT1Q9UGL9 99 aa3.71□□□□□ -1.81
SMPD4P1-203ENST00000443839 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
SMPD4P1-203ENST00000443839 KMT2DO14686 5537 aa3.66□□□□□ -1.82
SMPD4P1-203ENST00000443839 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
SMPD4P1-203ENST00000443839 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
SMPD4P1-203ENST00000443839 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
SMPD4P1-203ENST00000443839 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
SMPD4P1-203ENST00000443839 INE1O15225 51 aa3.62□□□□□ -1.83
SMPD4P1-203ENST00000443839 KRTAP8-1Q8IUC2 63 aa3.62□□□□□ -1.83
SMPD4P1-203ENST00000443839 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
SMPD4P1-203ENST00000443839 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
SMPD4P1-203ENST00000443839 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
SMPD4P1-203ENST00000443839 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.85
SMPD4P1-203ENST00000443839 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
SMPD4P1-203ENST00000443839 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
SMPD4P1-203ENST00000443839 MT3P25713 68 aa3.46□□□□□ -1.86
SMPD4P1-203ENST00000443839 MT1EP04732 61 aa3.45□□□□□ -1.86
SMPD4P1-203ENST00000443839 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
SMPD4P1-203ENST00000443839 MUC12Q9UKN1 5478 aa3.42□□□□□ -1.86
SMPD4P1-203ENST00000443839 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
SMPD4P1-203ENST00000443839 MT1LQ93083 61 aa3.38□□□□□ -1.87
SMPD4P1-203ENST00000443839 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.88
SMPD4P1-203ENST00000443839 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
SMPD4P1-203ENST00000443839 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
SMPD4P1-203ENST00000443839 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
SMPD4P1-203ENST00000443839 MT1GP13640 62 aa3.3□□□□□ -1.88
SMPD4P1-203ENST00000443839 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SMPD4P1-203ENST00000443839 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
SMPD4P1-203ENST00000443839 SPRR2EP22531 72 aa3.27□□□□□ -1.89
SMPD4P1-203ENST00000443839 SPRR2BP35325 72 aa3.27□□□□□ -1.89
SMPD4P1-203ENST00000443839 SPRR2AP35326 72 aa3.27□□□□□ -1.89
SMPD4P1-203ENST00000443839 MT1MQ8N339 61 aa3.26□□□□□ -1.89
SMPD4P1-203ENST00000443839 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
SMPD4P1-203ENST00000443839 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
SMPD4P1-203ENST00000443839 NEBP20929 6669 aa3.17□□□□□ -1.9
SMPD4P1-203ENST00000443839 SPRR2DP22532 72 aa3.16□□□□□ -1.9
SMPD4P1-203ENST00000443839 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
SMPD4P1-203ENST00000443839 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
SMPD4P1-203ENST00000443839 KRTAP2-3P0C7H8 128 aa2.97□□□□□ -1.93
SMPD4P1-203ENST00000443839 KRTAP2-4Q9BYR9 128 aa2.97□□□□□ -1.93
SMPD4P1-203ENST00000443839 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
SMPD4P1-203ENST00000443839 KRTAP20-1Q3LI63 56 aa2.95□□□□□ -1.94
SMPD4P1-203ENST00000443839 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
SMPD4P1-203ENST00000443839 MT1AP04731 61 aa2.87□□□□□ -1.95
SMPD4P1-203ENST00000443839 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
SMPD4P1-203ENST00000443839 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SMPD4P1-203ENST00000443839 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
SMPD4P1-203ENST00000443839 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
SMPD4P1-203ENST00000443839 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
SMPD4P1-203ENST00000443839 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
SMPD4P1-203ENST00000443839 MT4P47944 62 aa2.74□□□□□ -1.97
SMPD4P1-203ENST00000443839 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
SMPD4P1-203ENST00000443839 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
SMPD4P1-203ENST00000443839 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
SMPD4P1-203ENST00000443839 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
SMPD4P1-203ENST00000443839 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
SMPD4P1-203ENST00000443839 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
SMPD4P1-203ENST00000443839 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
SMPD4P1-203ENST00000443839 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
SMPD4P1-203ENST00000443839 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
SMPD4P1-203ENST00000443839 PRM1P04553 51 aa2.29□□□□□ -2.04
SMPD4P1-203ENST00000443839 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
SMPD4P1-203ENST00000443839 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
SMPD4P1-203ENST00000443839 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
SMPD4P1-203ENST00000443839 KRTAP5-1Q6L8H4 278 aa2.2□□□□□ -2.06
SMPD4P1-203ENST00000443839 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.06
SMPD4P1-203ENST00000443839 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.06
SMPD4P1-203ENST00000443839 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
SMPD4P1-203ENST00000443839 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
SMPD4P1-203ENST00000443839 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
SMPD4P1-203ENST00000443839 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
SMPD4P1-203ENST00000443839 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
SMPD4P1-203ENST00000443839 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
SMPD4P1-203ENST00000443839 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
SMPD4P1-203ENST00000443839 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
SMPD4P1-203ENST00000443839 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
SMPD4P1-203ENST00000443839 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms