RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 KRTAP4-3Q9BYR4 195 aa7.07□□□□□ -1.28
UBE2D4-205ENST00000443780 LCE1DQ5T752 114 aa7.03□□□□□ -1.28
UBE2D4-205ENST00000443780 LCE4AQ5TA78 99 aa7.03□□□□□ -1.28
UBE2D4-205ENST00000443780 KRTAP12-3P60328 96 aa7.02□□□□□ -1.29
UBE2D4-205ENST00000443780 MIR22HGQ0VDD5 57 aa7.01□□□□□ -1.29
UBE2D4-205ENST00000443780 MT4P47944 62 aa6.95□□□□□ -1.3
UBE2D4-205ENST00000443780 KRTAP25-1Q3LHN0 102 aa6.91□□□□□ -1.3
UBE2D4-205ENST00000443780 KRTAP5-4Q6L8H1 288 aa6.91□□□□□ -1.3
UBE2D4-205ENST00000443780 KRTAP4-7Q9BYR0 210 aa6.91□□□□□ -1.3
UBE2D4-205ENST00000443780 GPR98Q8WXG9 6306 aa6.9□□□□□ -1.31
UBE2D4-205ENST00000443780 V9GYY9 64 aa6.89□□□□□ -1.31
UBE2D4-205ENST00000443780 K7ERS5 55 aa6.88□□□□□ -1.31
UBE2D4-205ENST00000443780 PSPHP1O15172 72 aa6.87□□□□□ -1.31
UBE2D4-205ENST00000443780 HMCN1Q96RW7 5635 aa6.86□□□□□ -1.31
UBE2D4-205ENST00000443780 Q1T7F1 81 aa6.85□□□□□ -1.31
UBE2D4-205ENST00000443780 KRTAP4-6Q9BYQ5 205 aa6.77□□□□□ -1.33
UBE2D4-205ENST00000443780 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
UBE2D4-205ENST00000443780 KRTAP5-5Q701N2 237 aaPredicted RBP6.64□□□□□ -1.35
UBE2D4-205ENST00000443780 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
UBE2D4-205ENST00000443780 A6NED7 52 aa6.63□□□□□ -1.35
UBE2D4-205ENST00000443780 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
UBE2D4-205ENST00000443780 LOC100996750A0A140TA64 210 aa6.57□□□□□ -1.36
UBE2D4-205ENST00000443780 KRTAP15-1Q3LI76 137 aa6.56□□□□□ -1.36
UBE2D4-205ENST00000443780 KRTAP5-10Q6L8G5 202 aa6.53□□□□□ -1.36
UBE2D4-205ENST00000443780 KRTAP20-2Q3LI61 65 aa6.51□□□□□ -1.37
UBE2D4-205ENST00000443780 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
UBE2D4-205ENST00000443780 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
UBE2D4-205ENST00000443780 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
UBE2D4-205ENST00000443780 KRTAP12-4P60329 112 aa6.46□□□□□ -1.38
UBE2D4-205ENST00000443780 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
UBE2D4-205ENST00000443780 ROMO1P60602 79 aa6.42□□□□□ -1.38
UBE2D4-205ENST00000443780 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
UBE2D4-205ENST00000443780 SYNE1Q8NF91 8797 aaKnown RBP6.36□□□□□ -1.39
UBE2D4-205ENST00000443780 PCP4P48539 62 aa6.3□□□□□ -1.4
UBE2D4-205ENST00000443780 KRTAP5-7Q6L8G8 165 aa6.28□□□□□ -1.4
UBE2D4-205ENST00000443780 MT1AP04731 61 aa6.18□□□□□ -1.42
UBE2D4-205ENST00000443780 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.42
UBE2D4-205ENST00000443780 H3BS24 57 aa6.13□□□□□ -1.43
UBE2D4-205ENST00000443780 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
UBE2D4-205ENST00000443780 KRTAP5-2Q701N4 177 aa6.05□□□□□ -1.44
UBE2D4-205ENST00000443780 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
UBE2D4-205ENST00000443780 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
UBE2D4-205ENST00000443780 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
UBE2D4-205ENST00000443780 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
UBE2D4-205ENST00000443780 KRTAP5-8O75690 187 aa5.75□□□□□ -1.49
UBE2D4-205ENST00000443780 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
UBE2D4-205ENST00000443780 MT3P25713 68 aa5.65□□□□□ -1.5
UBE2D4-205ENST00000443780 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
UBE2D4-205ENST00000443780 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
UBE2D4-205ENST00000443780 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
UBE2D4-205ENST00000443780 AHNAKQ09666 5890 aaKnown RBP5.42□□□□□ -1.54
UBE2D4-205ENST00000443780 KRTAP5-1Q6L8H4 278 aa5.42□□□□□ -1.54
UBE2D4-205ENST00000443780 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
UBE2D4-205ENST00000443780 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
UBE2D4-205ENST00000443780 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
UBE2D4-205ENST00000443780 PRAC1Q96KF2 57 aa5.14□□□□□ -1.59
UBE2D4-205ENST00000443780 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
UBE2D4-205ENST00000443780 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
UBE2D4-205ENST00000443780 LCE1CQ5T751 118 aa4.82□□□□□ -1.64
UBE2D4-205ENST00000443780 PRO0628Q9UI54 55 aa4.82□□□□□ -1.64
UBE2D4-205ENST00000443780 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
UBE2D4-205ENST00000443780 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
UBE2D4-205ENST00000443780 SVIPQ8NHG7 77 aa4.47□□□□□ -1.69
UBE2D4-205ENST00000443780 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
UBE2D4-205ENST00000443780 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
UBE2D4-205ENST00000443780 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
UBE2D4-205ENST00000443780 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
UBE2D4-205ENST00000443780 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
UBE2D4-205ENST00000443780 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
UBE2D4-205ENST00000443780 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
UBE2D4-205ENST00000443780 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
UBE2D4-205ENST00000443780 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
UBE2D4-205ENST00000443780 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
UBE2D4-205ENST00000443780 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
UBE2D4-205ENST00000443780 PRM1P04553 51 aa3.28□□□□□ -1.88
UBE2D4-205ENST00000443780 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
UBE2D4-205ENST00000443780 INE1O15225 51 aa2.69□□□□□ -1.98
UBE2D4-205ENST00000443780 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms