RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 SPRR5A0A1B0GTR4 108 aa1.09□□□□□ -2.23
LINC00393-201ENST00000443621 LCE4AQ5TA78 99 aa1.09□□□□□ -2.23
LINC00393-201ENST00000443621 KRTAP12-3P60328 96 aa1.08□□□□□ -2.24
LINC00393-201ENST00000443621 LCE3AQ5TA76 89 aa1.08□□□□□ -2.24
LINC00393-201ENST00000443621 KRTAP9-7A8MTY7 169 aa1.07□□□□□ -2.24
LINC00393-201ENST00000443621 KRTAP10-7P60409 375 aaPredicted RBP1.07□□□□□ -2.24
LINC00393-201ENST00000443621 MT3P25713 68 aa1.06□□□□□ -2.24
LINC00393-201ENST00000443621 SSPOA2VEC9 5147 aa1.05□□□□□ -2.24
LINC00393-201ENST00000443621 KRTAP5-9P26371 169 aa1.04□□□□□ -2.24
LINC00393-201ENST00000443621 USH2AO75445 5202 aa1.03□□□□□ -2.24
LINC00393-201ENST00000443621 KRTAP19-7Q3SYF9 63 aa1.03□□□□□ -2.24
LINC00393-201ENST00000443621 MT1EP04732 61 aa1.02□□□□□ -2.25
LINC00393-201ENST00000443621 MT1GP13640 62 aa1.02□□□□□ -2.25
LINC00393-201ENST00000443621 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
LINC00393-201ENST00000443621 LCE3CQ5T5A8 94 aa1.02□□□□□ -2.25
LINC00393-201ENST00000443621 CRCT1Q9UGL9 99 aa1.02□□□□□ -2.25
LINC00393-201ENST00000443621 MT1LQ93083 61 aa1□□□□□ -2.25
LINC00393-201ENST00000443621 LCE1AQ5T7P2 110 aa0.99□□□□□ -2.25
LINC00393-201ENST00000443621 KRTAP19-3Q7Z4W3 81 aa0.99□□□□□ -2.25
LINC00393-201ENST00000443621 KRTAP2-2Q9BYT5 123 aa0.98□□□□□ -2.25
LINC00393-201ENST00000443621 KRTAP6-3Q3LI67 103 aa0.97□□□□□ -2.25
LINC00393-201ENST00000443621 FCGBPQ9Y6R7 5405 aaPredicted RBP0.96□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP5-4Q6L8H1 288 aa0.96□□□□□ -2.26
LINC00393-201ENST00000443621 MT1MQ8N339 61 aa0.95□□□□□ -2.26
LINC00393-201ENST00000443621 SPRR2FQ96RM1 72 aa0.95□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP4-4Q9BYR3 166 aa0.94□□□□□ -2.26
LINC00393-201ENST00000443621 FSIP2Q5CZC0 6907 aa0.94□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP2-1Q9BYU5 128 aa0.93□□□□□ -2.26
LINC00393-201ENST00000443621 KMT2DO14686 5537 aa0.92□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP5-11Q6L8G4 156 aa0.92□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP9-6A8MVA2 160 aa0.91□□□□□ -2.26
LINC00393-201ENST00000443621 LCE1FQ5T754 118 aa0.9□□□□□ -2.27
LINC00393-201ENST00000443621 MACF1Q9UPN3 7388 aaKnown RBP0.89□□□□□ -2.27
LINC00393-201ENST00000443621 SPRR2EP22531 72 aa0.89□□□□□ -2.27
LINC00393-201ENST00000443621 SPRR2BP35325 72 aa0.89□□□□□ -2.27
LINC00393-201ENST00000443621 SPRR2AP35326 72 aa0.89□□□□□ -2.27
LINC00393-201ENST00000443621 KRTAP5-5Q701N2 237 aaPredicted RBP0.89□□□□□ -2.27
LINC00393-201ENST00000443621 MT1AP04731 61 aa0.87□□□□□ -2.27
LINC00393-201ENST00000443621 SPRR2DP22532 72 aa0.87□□□□□ -2.27
LINC00393-201ENST00000443621 HMCN1Q96RW7 5635 aa0.87□□□□□ -2.27
LINC00393-201ENST00000443621 KRTAP5-2Q701N4 177 aa0.86□□□□□ -2.27
LINC00393-201ENST00000443621 MUC12Q9UKN1 5478 aa0.86□□□□□ -2.27
LINC00393-201ENST00000443621 KRTAP4-3Q9BYR4 195 aa0.84□□□□□ -2.27
LINC00393-201ENST00000443621 KRTAP12-4P60329 112 aa0.83□□□□□ -2.28
LINC00393-201ENST00000443621 MDN1Q9NU22 5596 aa0.83□□□□□ -2.28
LINC00393-201ENST00000443621 SYNE2Q8WXH0 6885 aaKnown RBP0.82□□□□□ -2.28
LINC00393-201ENST00000443621 KRTAP6-1Q3LI64 71 aa0.81□□□□□ -2.28
LINC00393-201ENST00000443621 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
LINC00393-201ENST00000443621 LCE1EQ5T753 118 aa0.79□□□□□ -2.28
LINC00393-201ENST00000443621 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
LINC00393-201ENST00000443621 KRTAP5-8O75690 187 aa0.78□□□□□ -2.28
LINC00393-201ENST00000443621 KRTAP20-1Q3LI63 56 aa0.78□□□□□ -2.28
LINC00393-201ENST00000443621 LCE3DQ9BYE3 92 aa0.78□□□□□ -2.28
LINC00393-201ENST00000443621 NEBP20929 6669 aa0.77□□□□□ -2.29
LINC00393-201ENST00000443621 GPR98Q8WXG9 6306 aa0.77□□□□□ -2.29
LINC00393-201ENST00000443621 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
LINC00393-201ENST00000443621 LCE3EQ5T5B0 92 aa0.76□□□□□ -2.29
LINC00393-201ENST00000443621 OBSCNQ5VST9 7968 aa0.75□□□□□ -2.29
LINC00393-201ENST00000443621 KRTAP6-2Q3LI66 62 aa0.74□□□□□ -2.29
LINC00393-201ENST00000443621 MT4P47944 62 aa0.7□□□□□ -2.3
LINC00393-201ENST00000443621 LCE1CQ5T751 118 aa0.68□□□□□ -2.3
LINC00393-201ENST00000443621 LCE1BQ5T7P3 118 aa0.68□□□□□ -2.3
LINC00393-201ENST00000443621 KRTAP5-7Q6L8G8 165 aa0.68□□□□□ -2.3
LINC00393-201ENST00000443621 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
LINC00393-201ENST00000443621 KRTAP5-10Q6L8G5 202 aa0.67□□□□□ -2.3
LINC00393-201ENST00000443621 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
LINC00393-201ENST00000443621 PRM1P04553 51 aa0.63□□□□□ -2.31
LINC00393-201ENST00000443621 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
LINC00393-201ENST00000443621 KRTAP21-2Q3LI59 83 aa0.56□□□□□ -2.32
LINC00393-201ENST00000443621 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
LINC00393-201ENST00000443621 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
LINC00393-201ENST00000443621 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
LINC00393-201ENST00000443621 MUC19Q7Z5P9 8384 aa0.41□□□□□ -2.34
LINC00393-201ENST00000443621 MUC16Q8WXI7 14507 aa0.31□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms