RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 SPRR5A0A1B0GTR4 108 aa1.09□□□□□ -2.23
LINC00393-201ENST00000443621 LCE4AQ5TA78 99 aa1.09□□□□□ -2.23
LINC00393-201ENST00000443621 KRTAP12-3P60328 96 aa1.08□□□□□ -2.24
LINC00393-201ENST00000443621 LCE3AQ5TA76 89 aa1.08□□□□□ -2.24
LINC00393-201ENST00000443621 KRTAP9-7A8MTY7 169 aa1.07□□□□□ -2.24
LINC00393-201ENST00000443621 KRTAP10-7P60409 375 aaPredicted RBP1.07□□□□□ -2.24
LINC00393-201ENST00000443621 MT3P25713 68 aa1.06□□□□□ -2.24
LINC00393-201ENST00000443621 SSPOA2VEC9 5147 aa1.05□□□□□ -2.24
LINC00393-201ENST00000443621 KRTAP5-9P26371 169 aa1.04□□□□□ -2.24
LINC00393-201ENST00000443621 USH2AO75445 5202 aa1.03□□□□□ -2.24
LINC00393-201ENST00000443621 KRTAP19-7Q3SYF9 63 aa1.03□□□□□ -2.24
LINC00393-201ENST00000443621 MT1EP04732 61 aa1.02□□□□□ -2.25
LINC00393-201ENST00000443621 MT1GP13640 62 aa1.02□□□□□ -2.25
LINC00393-201ENST00000443621 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
LINC00393-201ENST00000443621 LCE3CQ5T5A8 94 aa1.02□□□□□ -2.25
LINC00393-201ENST00000443621 CRCT1Q9UGL9 99 aa1.02□□□□□ -2.25
LINC00393-201ENST00000443621 MT1LQ93083 61 aa1□□□□□ -2.25
LINC00393-201ENST00000443621 LCE1AQ5T7P2 110 aa0.99□□□□□ -2.25
LINC00393-201ENST00000443621 KRTAP19-3Q7Z4W3 81 aa0.99□□□□□ -2.25
LINC00393-201ENST00000443621 KRTAP2-2Q9BYT5 123 aa0.98□□□□□ -2.25
LINC00393-201ENST00000443621 KRTAP6-3Q3LI67 103 aa0.97□□□□□ -2.25
LINC00393-201ENST00000443621 FCGBPQ9Y6R7 5405 aaPredicted RBP0.96□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP5-4Q6L8H1 288 aa0.96□□□□□ -2.26
LINC00393-201ENST00000443621 MT1MQ8N339 61 aa0.95□□□□□ -2.26
LINC00393-201ENST00000443621 SPRR2FQ96RM1 72 aa0.95□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP4-4Q9BYR3 166 aa0.94□□□□□ -2.26
LINC00393-201ENST00000443621 FSIP2Q5CZC0 6907 aa0.94□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP2-1Q9BYU5 128 aa0.93□□□□□ -2.26
LINC00393-201ENST00000443621 KMT2DO14686 5537 aa0.92□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP5-11Q6L8G4 156 aa0.92□□□□□ -2.26
LINC00393-201ENST00000443621 KRTAP9-6A8MVA2 160 aa0.91□□□□□ -2.26
LINC00393-201ENST00000443621 LCE1FQ5T754 118 aa0.9□□□□□ -2.27
LINC00393-201ENST00000443621 MACF1Q9UPN3 7388 aaKnown RBP0.89□□□□□ -2.27
LINC00393-201ENST00000443621 SPRR2EP22531 72 aa0.89□□□□□ -2.27
LINC00393-201ENST00000443621 SPRR2BP35325 72 aa0.89□□□□□ -2.27
LINC00393-201ENST00000443621 SPRR2AP35326 72 aa0.89□□□□□ -2.27
LINC00393-201ENST00000443621 KRTAP5-5Q701N2 237 aaPredicted RBP0.89□□□□□ -2.27
LINC00393-201ENST00000443621 MT1AP04731 61 aa0.87□□□□□ -2.27
LINC00393-201ENST00000443621 SPRR2DP22532 72 aa0.87□□□□□ -2.27
LINC00393-201ENST00000443621 HMCN1Q96RW7 5635 aa0.87□□□□□ -2.27
LINC00393-201ENST00000443621 KRTAP5-2Q701N4 177 aa0.86□□□□□ -2.27
LINC00393-201ENST00000443621 MUC12Q9UKN1 5478 aa0.86□□□□□ -2.27
LINC00393-201ENST00000443621 KRTAP4-3Q9BYR4 195 aa0.84□□□□□ -2.27
LINC00393-201ENST00000443621 KRTAP12-4P60329 112 aa0.83□□□□□ -2.28
LINC00393-201ENST00000443621 MDN1Q9NU22 5596 aa0.83□□□□□ -2.28
LINC00393-201ENST00000443621 SYNE2Q8WXH0 6885 aaKnown RBP0.82□□□□□ -2.28
LINC00393-201ENST00000443621 KRTAP6-1Q3LI64 71 aa0.81□□□□□ -2.28
LINC00393-201ENST00000443621 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
LINC00393-201ENST00000443621 LCE1EQ5T753 118 aa0.79□□□□□ -2.28
LINC00393-201ENST00000443621 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
LINC00393-201ENST00000443621 KRTAP5-8O75690 187 aa0.78□□□□□ -2.28
LINC00393-201ENST00000443621 KRTAP20-1Q3LI63 56 aa0.78□□□□□ -2.28
LINC00393-201ENST00000443621 LCE3DQ9BYE3 92 aa0.78□□□□□ -2.28
LINC00393-201ENST00000443621 NEBP20929 6669 aa0.77□□□□□ -2.29
LINC00393-201ENST00000443621 GPR98Q8WXG9 6306 aa0.77□□□□□ -2.29
LINC00393-201ENST00000443621 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
LINC00393-201ENST00000443621 LCE3EQ5T5B0 92 aa0.76□□□□□ -2.29
LINC00393-201ENST00000443621 OBSCNQ5VST9 7968 aa0.75□□□□□ -2.29
LINC00393-201ENST00000443621 KRTAP6-2Q3LI66 62 aa0.74□□□□□ -2.29
LINC00393-201ENST00000443621 MT4P47944 62 aa0.7□□□□□ -2.3
LINC00393-201ENST00000443621 LCE1CQ5T751 118 aa0.68□□□□□ -2.3
LINC00393-201ENST00000443621 LCE1BQ5T7P3 118 aa0.68□□□□□ -2.3
LINC00393-201ENST00000443621 KRTAP5-7Q6L8G8 165 aa0.68□□□□□ -2.3
LINC00393-201ENST00000443621 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
LINC00393-201ENST00000443621 KRTAP5-10Q6L8G5 202 aa0.67□□□□□ -2.3
LINC00393-201ENST00000443621 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
LINC00393-201ENST00000443621 PRM1P04553 51 aa0.63□□□□□ -2.31
LINC00393-201ENST00000443621 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
LINC00393-201ENST00000443621 KRTAP21-2Q3LI59 83 aa0.56□□□□□ -2.32
LINC00393-201ENST00000443621 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
LINC00393-201ENST00000443621 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
LINC00393-201ENST00000443621 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
LINC00393-201ENST00000443621 MUC19Q7Z5P9 8384 aa0.41□□□□□ -2.34
LINC00393-201ENST00000443621 MUC16Q8WXI7 14507 aa0.31□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms