RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 MT1LQ93083 61 aa4.62□□□□□ -1.67
PDLIM2-212ENST00000443561 A6NED7 52 aa4.59□□□□□ -1.67
PDLIM2-212ENST00000443561 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
PDLIM2-212ENST00000443561 MT1GP13640 62 aa4.55□□□□□ -1.68
PDLIM2-212ENST00000443561 MT1MQ8N339 61 aa4.55□□□□□ -1.68
PDLIM2-212ENST00000443561 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
PDLIM2-212ENST00000443561 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
PDLIM2-212ENST00000443561 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
PDLIM2-212ENST00000443561 K7ERS5 55 aa4.49□□□□□ -1.69
PDLIM2-212ENST00000443561 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
PDLIM2-212ENST00000443561 CDC42SE1Q9NRR8 79 aa4.46□□□□□ -1.7
PDLIM2-212ENST00000443561 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
PDLIM2-212ENST00000443561 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
PDLIM2-212ENST00000443561 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
PDLIM2-212ENST00000443561 ROMO1P60602 79 aa4.35□□□□□ -1.71
PDLIM2-212ENST00000443561 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
PDLIM2-212ENST00000443561 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
PDLIM2-212ENST00000443561 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
PDLIM2-212ENST00000443561 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
PDLIM2-212ENST00000443561 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
PDLIM2-212ENST00000443561 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
PDLIM2-212ENST00000443561 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
PDLIM2-212ENST00000443561 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
PDLIM2-212ENST00000443561 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
PDLIM2-212ENST00000443561 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
PDLIM2-212ENST00000443561 KRTAP5-7Q6L8G8 165 aa4.17□□□□□ -1.74
PDLIM2-212ENST00000443561 MT4P47944 62 aa4.16□□□□□ -1.74
PDLIM2-212ENST00000443561 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
PDLIM2-212ENST00000443561 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
PDLIM2-212ENST00000443561 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
PDLIM2-212ENST00000443561 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
PDLIM2-212ENST00000443561 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
PDLIM2-212ENST00000443561 KRTAP5-3Q6L8H2 238 aa4.04□□□□□ -1.76
PDLIM2-212ENST00000443561 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
PDLIM2-212ENST00000443561 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
PDLIM2-212ENST00000443561 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
PDLIM2-212ENST00000443561 MT1AP04731 61 aa3.91□□□□□ -1.78
PDLIM2-212ENST00000443561 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
PDLIM2-212ENST00000443561 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
PDLIM2-212ENST00000443561 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
PDLIM2-212ENST00000443561 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
PDLIM2-212ENST00000443561 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
PDLIM2-212ENST00000443561 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
PDLIM2-212ENST00000443561 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
PDLIM2-212ENST00000443561 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
PDLIM2-212ENST00000443561 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
PDLIM2-212ENST00000443561 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
PDLIM2-212ENST00000443561 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
PDLIM2-212ENST00000443561 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
PDLIM2-212ENST00000443561 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
PDLIM2-212ENST00000443561 MT3P25713 68 aa3.5□□□□□ -1.85
PDLIM2-212ENST00000443561 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
PDLIM2-212ENST00000443561 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
PDLIM2-212ENST00000443561 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
PDLIM2-212ENST00000443561 SVIPQ8NHG7 77 aa3.31□□□□□ -1.88
PDLIM2-212ENST00000443561 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
PDLIM2-212ENST00000443561 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
PDLIM2-212ENST00000443561 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
PDLIM2-212ENST00000443561 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
PDLIM2-212ENST00000443561 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
PDLIM2-212ENST00000443561 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
PDLIM2-212ENST00000443561 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
PDLIM2-212ENST00000443561 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
PDLIM2-212ENST00000443561 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
PDLIM2-212ENST00000443561 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
PDLIM2-212ENST00000443561 NDUFAF8A1L188 74 aa2.64□□□□□ -1.99
PDLIM2-212ENST00000443561 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
PDLIM2-212ENST00000443561 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
PDLIM2-212ENST00000443561 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
PDLIM2-212ENST00000443561 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
PDLIM2-212ENST00000443561 H3BS24 57 aa2.3□□□□□ -2.04
PDLIM2-212ENST00000443561 PRM1P04553 51 aa2.27□□□□□ -2.05
PDLIM2-212ENST00000443561 A0A0A0MQY5 61 aa2.26□□□□□ -2.05
PDLIM2-212ENST00000443561 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
PDLIM2-212ENST00000443561 INE1O15225 51 aa2.08□□□□□ -2.08
PDLIM2-212ENST00000443561 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
PDLIM2-212ENST00000443561 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 1043.5 ms