RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 KRTAP5-3Q6L8H2 238 aa7.31□□□□□ -1.24
POLR2J3-202ENST00000443430 MT1LQ93083 61 aa7.31□□□□□ -1.24
POLR2J3-202ENST00000443430 KRTAP4-3Q9BYR4 195 aa7.31□□□□□ -1.24
POLR2J3-202ENST00000443430 KRTAP12-1P59990 96 aa7.29□□□□□ -1.24
POLR2J3-202ENST00000443430 SMIM26A0A096LP01 95 aa7.23□□□□□ -1.25
POLR2J3-202ENST00000443430 A8MU10 97 aa7.19□□□□□ -1.26
POLR2J3-202ENST00000443430 PRR15LQ9BU68 103 aa7.1□□□□□ -1.27
POLR2J3-202ENST00000443430 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
POLR2J3-202ENST00000443430 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
POLR2J3-202ENST00000443430 KRTAP20-2Q3LI61 65 aa7.07□□□□□ -1.28
POLR2J3-202ENST00000443430 PCP4P48539 62 aa7.02□□□□□ -1.29
POLR2J3-202ENST00000443430 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
POLR2J3-202ENST00000443430 LCE3AQ5TA76 89 aa6.96□□□□□ -1.3
POLR2J3-202ENST00000443430 TNP1P09430 55 aa6.95□□□□□ -1.3
POLR2J3-202ENST00000443430 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
POLR2J3-202ENST00000443430 KRTAP5-5Q701N2 237 aaPredicted RBP6.88□□□□□ -1.31
POLR2J3-202ENST00000443430 Q1T7F1 81 aa6.86□□□□□ -1.31
POLR2J3-202ENST00000443430 UQCR11O14957 56 aa6.85□□□□□ -1.31
POLR2J3-202ENST00000443430 KRTAP12-4P60329 112 aa6.83□□□□□ -1.32
POLR2J3-202ENST00000443430 SYNE1Q8NF91 8797 aaKnown RBP6.82□□□□□ -1.32
POLR2J3-202ENST00000443430 RPS28P62857 69 aaKnown RBP6.82□□□□□ -1.32
POLR2J3-202ENST00000443430 V9GYY9 64 aa6.79□□□□□ -1.32
POLR2J3-202ENST00000443430 PSPHP1O15172 72 aa6.7□□□□□ -1.34
POLR2J3-202ENST00000443430 MIR22HGQ0VDD5 57 aa6.7□□□□□ -1.34
POLR2J3-202ENST00000443430 KRTAP12-3P60328 96 aa6.68□□□□□ -1.34
POLR2J3-202ENST00000443430 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
POLR2J3-202ENST00000443430 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
POLR2J3-202ENST00000443430 K7ERS5 55 aa6.6□□□□□ -1.35
POLR2J3-202ENST00000443430 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
POLR2J3-202ENST00000443430 AHNAKQ09666 5890 aaKnown RBP6.55□□□□□ -1.36
POLR2J3-202ENST00000443430 MUC5BQ9HC84 5762 aaPredicted RBP6.48□□□□□ -1.37
POLR2J3-202ENST00000443430 MUC5ACP98088 5654 aa6.46□□□□□ -1.37
POLR2J3-202ENST00000443430 A6NED7 52 aa6.46□□□□□ -1.38
POLR2J3-202ENST00000443430 KRTAP5-2Q701N4 177 aa6.43□□□□□ -1.38
POLR2J3-202ENST00000443430 KRTAP5-8O75690 187 aa6.41□□□□□ -1.38
POLR2J3-202ENST00000443430 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
POLR2J3-202ENST00000443430 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
POLR2J3-202ENST00000443430 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
POLR2J3-202ENST00000443430 OBSCNQ5VST9 7968 aa6.24□□□□□ -1.41
POLR2J3-202ENST00000443430 KRTAP6-1Q3LI64 71 aa6.23□□□□□ -1.41
POLR2J3-202ENST00000443430 MT1AP04731 61 aa6.21□□□□□ -1.42
POLR2J3-202ENST00000443430 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
POLR2J3-202ENST00000443430 KRTAP9-9Q9BYP9 154 aa6.16□□□□□ -1.42
POLR2J3-202ENST00000443430 ROMO1P60602 79 aa6.13□□□□□ -1.43
POLR2J3-202ENST00000443430 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
POLR2J3-202ENST00000443430 KRTAP9-4Q9BYQ2 154 aa6.07□□□□□ -1.44
POLR2J3-202ENST00000443430 KRTAP6-2Q3LI66 62 aa6.06□□□□□ -1.44
POLR2J3-202ENST00000443430 BRK1Q8WUW1 75 aa5.91□□□□□ -1.46
POLR2J3-202ENST00000443430 KRTAP5-1Q6L8H4 278 aa5.88□□□□□ -1.47
POLR2J3-202ENST00000443430 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
POLR2J3-202ENST00000443430 MT3P25713 68 aa5.7□□□□□ -1.5
POLR2J3-202ENST00000443430 PMAIP1Q13794 54 aa5.57□□□□□ -1.52
POLR2J3-202ENST00000443430 PRO0628Q9UI54 55 aa5.52□□□□□ -1.53
POLR2J3-202ENST00000443430 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
POLR2J3-202ENST00000443430 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
POLR2J3-202ENST00000443430 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
POLR2J3-202ENST00000443430 KRTAP4-2Q9BYR5 136 aa5.17□□□□□ -1.58
POLR2J3-202ENST00000443430 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
POLR2J3-202ENST00000443430 LCE1CQ5T751 118 aa5□□□□□ -1.61
POLR2J3-202ENST00000443430 KRTAP4-12Q9BQ66 201 aa4.91□□□□□ -1.62
POLR2J3-202ENST00000443430 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
POLR2J3-202ENST00000443430 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
POLR2J3-202ENST00000443430 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
POLR2J3-202ENST00000443430 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
POLR2J3-202ENST00000443430 PHGR1C9JFL3 82 aa4.46□□□□□ -1.7
POLR2J3-202ENST00000443430 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
POLR2J3-202ENST00000443430 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
POLR2J3-202ENST00000443430 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
POLR2J3-202ENST00000443430 KRTAP21-2Q3LI59 83 aa4.12□□□□□ -1.75
POLR2J3-202ENST00000443430 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
POLR2J3-202ENST00000443430 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
POLR2J3-202ENST00000443430 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
POLR2J3-202ENST00000443430 KRTAP21-1Q3LI58 79 aa3.39□□□□□ -1.87
POLR2J3-202ENST00000443430 H3BS24 57 aa3.19□□□□□ -1.9
POLR2J3-202ENST00000443430 INE1O15225 51 aa3.16□□□□□ -1.9
POLR2J3-202ENST00000443430 PRM1P04553 51 aa3.16□□□□□ -1.9
POLR2J3-202ENST00000443430 A0A0A0MQY5 61 aa3.11□□□□□ -1.91
POLR2J3-202ENST00000443430 MUC16Q8WXI7 14507 aa2.69□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms